Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02125 and BPUM_2773

See DNA alignment / Visit BSNT_02125 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:33
# Commandline: needle
#    -asequence pep-align/BSNT_02125___xtrA.1.24716.seq
#    -bsequence pep-align/BPUM_2773___yqaO.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02125___xtrA-BPUM_2773___yqaO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02125___xtrA-BPUM_2773___yqaO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02125___xtrA
# 2: BPUM_2773___yqaO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 68
# Identity:      30/68 (44.1%)
# Similarity:    47/68 (69.1%)
# Gaps:           0/68 ( 0.0%)
# Score: 157.0
# 
#
#=======================================

BSNT_02125___      1 MIHPKKLLHIDSITLKSQLEEGKIRVIIVDGIKQEAWITEAPEHGKTLVE     50
                     |..||:|...::.|...::|.|||:||::||....|:..:.||||||:::
BPUM_2773___y      1 MNEPKQLFIQENQTFVGEMETGKIQVIVLDGNVGTAYQIDVPEHGKTIIQ     50

BSNT_02125___     51 TRKGDLARVEFEIGYKLN     68
                     |.||..|||:.|||:|::
BPUM_2773___y     51 TAKGHFARVDHEIGFKIS     68


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