Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05300 and BPUM_2353

See DNA alignment / Visit BSNT_05300 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:53
# Commandline: needle
#    -asequence pep-align/BSNT_05300___yvcC.1.24716.seq
#    -bsequence pep-align/BPUM_2353.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05300___yvcC-BPUM_2353.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05300___yvcC-BPUM_2353.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05300___yvcC
# 2: BPUM_2353
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 589
# Identity:     257/589 (43.6%)
# Similarity:   386/589 (65.5%)
# Gaps:          17/589 ( 2.9%)
# Score: 1310.0
# 
#
#=======================================

BSNT_05300___      1 MPNQKQKSKSKLKPFFALVRRTNPSYGKLAFALALSVVTTLVSLLIPLLT     50
                            .|.|:...:.|:.|:..:.|:|.....:|:|.....|.:||||
BPUM_2353          1 -------MKGKISQLWILMNRSQMANGQLVLLFFISIVEVAAGLAVPLLT     43

BSNT_05300___     51 KQLVDDFSMSNLSGTQIGLIALVFFVQAGLSAYATYALNYNGQKIISGLR    100
                     .:|::..|.:..:.|.:..:..|..|||.|||...|.:...|:.:::.||
BPUM_2353         44 MKLINQISDTGFALTSLLPVIGVLIVQAMLSAVTFYMMRRLGEGVVANLR     93

BSNT_05300___    101 ELLWKKLIKLPVSYFDTNASGETVSRVTNDTMVVKELITTHISGFITGII    150
                     ..:|:.::.|.::|:|.:.||||:||:|.||.||||.:|..:..|::|:.
BPUM_2353         94 TEIWEHMLHLRLTYYDAHESGETMSRITQDTNVVKEFVTEKLVSFVSGLF    143

BSNT_05300___    151 SVIGSLTILFIMNWKLTLLVLVVVPLAALILVPIGRKMFSISRETQDETA    200
                     :::|::.:|..::||:|||:|:.|||...:..|:|.||::||:..|||.|
BPUM_2353        144 AILGAIVVLLWIDWKMTLLLLIAVPLTIFVTYPLGEKMYAISKANQDELA    193

BSNT_05300___    201 RFTGLLNQILPEIRLVKASNAEDVEYGRGKMGISSLFKLGVREAKVQSLV    250
                     .|.|.|.:||..|||||||..|..|...||..|..|:|.|::|||:.:::
BPUM_2353        194 GFGGRLGRILTNIRLVKASQTEQQELAGGKKQIQQLYKYGLKEAKIVAIL    243

BSNT_05300___    251 GPLISLVLMAALVAVIGYGGMQVSSGELTAGALVAFILYLFQIIMPMGQI    300
                     .||::|::|..::|:.||||.||:||.:::|.|||.::||.|||||..|:
BPUM_2353        244 SPLMTLLMMIVIIAIFGYGGSQVASGAISSGELVAIMIYLVQIIMPFTQM    293

BSNT_05300___    301 TTFFTQLQKSIGATERMIEILAEEEEDTVTGKQIENAHLPIQLDRVSFGY    350
                     .||||.|||::|||||::|.| :|:.:...|:.:.....||..:.|||.|
BPUM_2353        294 ATFFTDLQKTLGATERIVEAL-DEKREVQDGEPVTATSQPIHFEHVSFKY    342

BSNT_05300___    351 KPDQLILKEVSAVIEAGKVTAIVGPSGGGKTTLFKLLERFYSPTAGSIRL    400
                     . ::.:||:::..::..:.||.|..|||||||:|.|:||||..|:|:|..
BPUM_2353        343 N-EKYVLKDMTFTLKPNETTAFVSRSGGGKTTMFSLIERFYVVTSGAILY    391

BSNT_05300___    401 GDEPIDTYSLESWREHIGYVSQESPLMSGTIRENICYGLERDVTDAEIEK    450
                     |.|.|:.::|..|||..|||||.:||::||||:|:.|| ....::.|:..
BPUM_2353        392 GKENIEQFNLIEWRELFGYVSQNAPLLNGTIRDNVMYG-TNGASEQEVLA    440

BSNT_05300___    451 AAEMAYALNFIKELPNQFDTEVGERGIMLSGGQRQRIAIARALLRNPSIL    500
                     |.:.|||.:|:.:|....||||||.||.|||||:||||||||:||||.||
BPUM_2353        441 ALKAAYAYDFVMQLEKHLDTEVGEGGIKLSGGQKQRIAIARAILRNPRIL    490

BSNT_05300___    501 MLDEATSSLDSQSEKSVQQALEVLMEGRTTIVIAHRLSTVVDADQLLFVE    550
                     :||||||:||::||:.||.||:.|.:.|.||:|||||||:..|||:|..|
BPUM_2353        491 LLDEATSNLDNESEREVQLALQALTKNRMTIIIAHRLSTITSADQILVFE    540

BSNT_05300___    551 KGEITGRGTHHELMASHGLYRDFAEQQLKMNADLENKAG    589
                     :|.::|:|||..|..:|..|     |||..|..|...  
BPUM_2353        541 EGRLSGQGTHEALQKTHPYY-----QQLWHNGRLTED--    572


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_05300 and BPUM_2353

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
