Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03564 and BPUM_2135
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:05
# Commandline: needle
# -asequence pep-align/BSNT_03564___yqjA.1.24716.seq
# -bsequence pep-align/BPUM_2135___yqjA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03564___yqjA-BPUM_2135___yqjA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03564___yqjA-BPUM_2135___yqjA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03564___yqjA
# 2: BPUM_2135___yqjA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 322
# Identity: 246/322 (76.4%)
# Similarity: 290/322 (90.1%)
# Gaps: 5/322 ( 1.6%)
# Score: 1304.0
#
#
#=======================================
BSNT_03564___ 1 MFKIGYRTIKTALGTALAIYISQLLHLQNFASAGIITILCIQITQKRSLQ 50
||||||||:|||||||:||||:|||.|||:::||||||||||:|:||||.
BPUM_2135___y 1 MFKIGYRTLKTALGTAIAIYIAQLLGLQNYSAAGIITILCIQVTKKRSLL 50
BSNT_03564___ 51 ASWARFAACCLAIVFSYLFFELIGYHPFVIGALLLIFIPITVLLKINEGI 100
||.||||||.|||:||||||:||||||||||.:||||||.||||:|.|||
BPUM_2135___y 51 ASGARFAACSLAILFSYLFFDLIGYHPFVIGLMLLIFIPTTVLLRIKEGI 100
BSNT_03564___ 101 VTSSVIILHLYMSGGITLAFIWNEVQLITVGIGVALLMNLYMPSLDRKLI 150
||||||||||||||||||..||||:.|||:|:||||:|||||||:|:||.
BPUM_2135___y 101 VTSSVIILHLYMSGGITLHLIWNELLLITIGVGVALIMNLYMPSVDKKLK 150
BSNT_03564___ 151 AYRKKIEDNFAVIFAEIERYLLTGEQDWSGKEIPETHQLITEAKNLAYRD 200
.|.::||.|||.||.|||:||:||:|||:|||||||||||.|||.|||||
BPUM_2135___y 151 RYSEQIEANFAKIFEEIEQYLITGKQDWTGKEIPETHQLIKEAKALAYRD 200
BSNT_03564___ 201 VQNHILRYENLHYHYFKMREKQFEIIERLLPKVTSISITVDQGKMIAEFI 250
|:||:||:|||:||||.||:||||||||:|||:||||||.:.|::|||:|
BPUM_2135___y 201 VENHVLRHENLYYHYFNMRQKQFEIIERVLPKITSISITTEHGQIIAEYI 250
BSNT_03564___ 251 HDLREAIHPGNTAYKFLKRLADMRKEFEEMPLPATREEFEARAALFHLLG 300
.||||.|||||||:|||:||.||::||:::|||.|||||||||||||.||
BPUM_2135___y 251 RDLREHIHPGNTAHKFLRRLIDMKEEFDKLPLPQTREEFEARAALFHFLG 300
BSNT_03564___ 301 EMEQYLVIKSYFKGIKAQKSLG 322
|||||||:||||||:|.
BPUM_2135___y 301 EMEQYLVLKSYFKGMKE----- 317
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