Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03527 and BPUM_2102
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:03
# Commandline: needle
# -asequence pep-align/BSNT_03527___yqjW.1.24716.seq
# -bsequence pep-align/BPUM_2102___polY2.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03527___yqjW-BPUM_2102___polY2.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03527___yqjW-BPUM_2102___polY2.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03527___yqjW
# 2: BPUM_2102___polY2
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 411
# Identity: 262/411 (63.7%)
# Similarity: 321/411 (78.1%)
# Gaps: 1/411 ( 0.2%)
# Score: 1374.0
#
#
#=======================================
BSNT_03527___ 1 MKEKVIFLVDMQSFYASVEKAENPHLKNRPVIVSGDPEKRGGVVLAACPL 50
|.|:.|.|||||||||||||.|.||||:.|:|||||||:|.|||||||||
BPUM_2102___p 1 MNERAILLVDMQSFYASVEKVEAPHLKDVPLIVSGDPERRSGVVLAACPL 50
BSNT_03527___ 51 AKQKGVVNASRLWEAQEKCPEAVVLRPRMQRYIDVSLQITAILEEYTDLV 100
||::||.|||||||||||||||||:|||||||:|:|:.||.:||:|||||
BPUM_2102___p 51 AKKRGVQNASRLWEAQEKCPEAVVVRPRMQRYLDISVMITELLEQYTDLV 100
BSNT_03527___ 101 EPYSIDEQFMDITGSQKLFGTPMEIAKSIQGRIMREIGVYARVGIGPNKA 150
|||||||||:|||||..|.|:|.|||::||..||.:.|:||||||||||.
BPUM_2102___p 101 EPYSIDEQFLDITGSLTLLGSPREIAQNIQTTIMNQTGIYARVGIGPNKV 150
BSNT_03527___ 151 LAKIACDNFAKKNKNGIFTLTKENMKTEMWPLPVGSMFGVGSRMKHHLNR 200
|||:|||:|||||.:||:.|..:::..::||||:|.:||||.||:|||.|
BPUM_2102___p 151 LAKMACDHFAKKNSSGIYELRADSVSADLWPLPIGKLFGVGKRMEHHLKR 200
BSNT_03527___ 201 MGISTIGGLAAFPLDLLKKKWGINGHVLWMTANGIDYSPVSTSSLDGQKA 250
|||||||.||.:|||.|||:|||||.:|..||.|.|.|||:..:.:.|||
BPUM_2102___p 201 MGISTIGTLATYPLDRLKKRWGINGEILQRTALGHDPSPVTVHTHNEQKA 250
BSNT_03527___ 251 IGHGMTLPRDYEHFDKEIKVVLLELSEEVCRRSRNAGVMGQTVSVSCRGA 300
:||.||||.||..|: :|||.||||||||.||:|....:||||||..|||
BPUM_2102___p 251 VGHHMTLPHDYASFE-DIKVALLELSEEVARRARFKHYLGQTVSVGVRGA 299
BSNT_03527___ 301 DFDWPTGFNRQVKLAEPTNSTQDVYEAVRRLFLTFWDGKPVRRLGVNLSQ 350
||..||||:||:||..||....|:.||..:|....|||:|:|.:|:.|||
BPUM_2102___p 300 DFSHPTGFHRQIKLHSPTQYGTDIAEAAIQLCQQHWDGQPIRSVGITLSQ 349
BSNT_03527___ 351 LSSDDIWQLNLFQDYAKKMSLGYVMDGIKNRFGDTAIIRAASLTAAGQAF 400
|.||..:|||||..:.:|..|..|.|.|..::|..|::.|:|||:||||:
BPUM_2102___p 350 LQSDSQYQLNLFDHHVQKDKLSKVFDAIHIKYGPAALLHASSLTSAGQAY 399
BSNT_03527___ 401 ERAAKIGGHYK 411
.||.|||||||
BPUM_2102___p 400 HRAEKIGGHYK 410
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