Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03494 and BPUM_2080

See DNA alignment / Visit BSNT_03494 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:01
# Commandline: needle
#    -asequence pep-align/BSNT_03494___punA.1.24716.seq
#    -bsequence pep-align/BPUM_2080___punA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03494___punA-BPUM_2080___punA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03494___punA-BPUM_2080___punA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03494___punA
# 2: BPUM_2080___punA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 271
# Identity:     203/271 (74.9%)
# Similarity:   230/271 (84.9%)
# Gaps:           1/271 ( 0.4%)
# Score: 1042.0
# 
#
#=======================================

BSNT_03494___      1 MKDRIERAAAFIKQNLPESPKIGLILGSGLGILADEIENPVKLKYEDIPE     50
                     |..:...|||:|||.....|.:||||||||||||||||||:||||||||.
BPUM_2080___p      1 MGAQFSEAAAYIKQASTYVPTVGLILGSGLGILADEIENPIKLKYEDIPG     50

BSNT_03494___     51 FPVSTVEGHAGQLVLGTLEGVSVIAMQGRFHFYEGYSMEKVTFPVRVMKA    100
                     ||||||||||||||:|||:|..|.||||||||||||.|::|||||||||.
BPUM_2080___p     51 FPVSTVEGHAGQLVIGTLKGTVVCAMQGRFHFYEGYDMKQVTFPVRVMKE    100

BSNT_03494___    101 LGVEALIVTNAAGGVNTEFRAGDLMIITDHINFMGTNPLIGPNEADFGAR    150
                     :|:|..|||||||||||.|..||||:||||||.||||||||||::. |.|
BPUM_2080___p    101 IGIETCIVTNAAGGVNTSFHPGDLMLITDHINMMGTNPLIGPNDSQ-GVR    149

BSNT_03494___    151 FPDMSSAYDKDLSSLAEKIAKDLNIPIQKGVYTAVTGPSYETPAEVRFLR    200
                     |||||:.|||||.:|||:.|:.|.|.:|:|||..:|||||||||||||||
BPUM_2080___p    150 FPDMSAPYDKDLLALAEETAQRLGISVQQGVYAGMTGPSYETPAEVRFLR    199

BSNT_03494___    201 TMGSDAVGMSTVPEVIVANHAGMRVLGISCISNAAAGILDQPLSHDEVME    250
                     |:|:||||||||||||||.|||::|||||||||||:||||||||||||:|
BPUM_2080___p    200 TLGADAVGMSTVPEVIVARHAGIKVLGISCISNAASGILDQPLSHDEVIE    249

BSNT_03494___    251 VTEKVKAGFLKLVKAIVAQYE    271
                     |||||||.||.|||.:|.|..
BPUM_2080___p    250 VTEKVKASFLDLVKDVVKQLS    270


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