Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02965 and BPUM_1693

See DNA alignment / Visit BSNT_02965 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:29
# Commandline: needle
#    -asequence pep-align/BSNT_02965___ynzD.1.24716.seq
#    -bsequence pep-align/BPUM_1693___ynzD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02965___ynzD-BPUM_1693___ynzD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02965___ynzD-BPUM_1693___ynzD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02965___ynzD
# 2: BPUM_1693___ynzD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 64
# Identity:      28/64 (43.8%)
# Similarity:    43/64 (67.2%)
# Gaps:           3/64 ( 4.7%)
# Score: 136.0
# 
#
#=======================================

BSNT_02965___      1 -MKGYIPVIREHLLKEIEKKRAELLQIVMANGMTSHITIELSQELDHLLI     49
                      .:..:.:::..||.:||:||.||:::|:.|||||.:|||.||:|||||:
BPUM_1693___y      1 MHERNMTLVKTSLLTQIEEKREELMKVVLHNGMTSTVTIEHSQQLDHLLL     50

BSNT_02965___     50 QYQKQRLRAVAGDE     63
                     |||:......|.  
BPUM_1693___y     51 QYQRHLHSNSAN--     62


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