Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02646 and BPUM_1521

See DNA alignment / Visit BSNT_02646 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:14
# Commandline: needle
#    -asequence pep-align/BSNT_02646.1.24716.seq
#    -bsequence pep-align/BPUM_1521___fliH.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02646-BPUM_1521___fliH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02646-BPUM_1521___fliH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02646
# 2: BPUM_1521___fliH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 254
# Identity:     116/254 (45.7%)
# Similarity:   177/254 (69.7%)
# Gaps:           4/254 ( 1.6%)
# Score: 613.5
# 
#
#=======================================

BSNT_02646         1 MSNIIKQESSISPQKEKRKLSIQEVRIDHSH----LLQAEENSEALMARV     46
                     ||.|||.|:|:.|::.::.:.:|:|.....|    |:...|.|:.:::..
BPUM_1521___f      1 MSRIIKHETSVIPEQRRQTIPLQQVEFKKEHHEEELVNETEASQLVLSDA     50

BSNT_02646        47 KEEADRISEQANSHIENIRRQIEQEKNDWAAEKQKLIEEAKTEGFEQGVA     96
                     :::|.||.||||:.:|....:|.|.:.|:..|:.:||||||..|::.|..
BPUM_1521___f     51 EDQASRIVEQANNELEKTMAEINQRRADFEEERMQLIEEAKQAGYQDGFQ    100

BSNT_02646        97 LGKAEALQQYAELIGQANSITEMSRKAVEDKLEDANEEIVELAVALAKKV    146
                     .|:|:|:.||..::.|||.|..::::..|:|:|.:.|:|||||..|||:|
BPUM_1521___f    101 KGEADAMSQYQSILDQANDIVSLAKQDYEEKIESSAEKIVELAFELAKRV    150

BSNT_02646       147 WQQKSDDKEAFLLLVQQVINEVKEYDDISIYVDPYYYETIFQQKDEIQQL    196
                     |....|.|:.||.||:|||:||||||||||||||.:|:.:.:.|||:.::
BPUM_1521___f    151 WYSADDTKDQFLALVKQVISEVKEYDDISIYVDPEHYDHVMEYKDELIRI    200

BSNT_02646       197 LYKECRLGIYADEKAQKGTCYIETPFGRVDASVDTQLMQLKDKLLTALEA    246
                     |.|:..|.||:||||.|||||:||.||:|:||||||:.|||:|||..:::
BPUM_1521___f    201 LQKDTHLAIYSDEKAPKGTCYVETSFGKVEASVDTQMNQLKEKLLEVIDS    250

BSNT_02646       247 GAAE    250
                     |..:
BPUM_1521___f    251 GDHK    254


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