Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02442 and BPUM_1365

See DNA alignment / Visit BSNT_02442 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:55
# Commandline: needle
#    -asequence pep-align/BSNT_02442___yktC.1.24716.seq
#    -bsequence pep-align/BPUM_1365___suhB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02442___yktC-BPUM_1365___suhB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02442___yktC-BPUM_1365___suhB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02442___yktC
# 2: BPUM_1365___suhB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 268
# Identity:     178/268 (66.4%)
# Similarity:   216/268 (80.6%)
# Gaps:           3/268 ( 1.1%)
# Score: 966.0
# 
#
#=======================================

BSNT_02442___      1 MTNWTEIDEIAKKWIREAGARIKQSMHESLTIETKSNPNDLVTNIDKETE     50
                     ||||.|||.:||.|::|||:|||.||.:.|:|||||||||||||||||||
BPUM_1365___s      1 MTNWVEIDRLAKLWVKEAGSRIKASMQDGLSIETKSNPNDLVTNIDKETE     50

BSNT_02442___     51 KFFIDRIQETFPGHRILGEEGQGDKIHSLEGVVWIIDPIDGTMNFVHQQR    100
                     :|||::||.||..|.||||||||:::.||:||||||||||||||||||:|
BPUM_1365___s     51 RFFIEKIQSTFSDHHILGEEGQGEEVTSLDGVVWIIDPIDGTMNFVHQKR    100

BSNT_02442___    101 NFAISIGIFENGEGKIGLIYDVVHDELYHAFSGRGAYMNETKLAPLKETV    150
                     ||||||||||||.|||||||||:|||||||..|.|||||:|.|.|||:..
BPUM_1365___s    101 NFAISIGIFENGIGKIGLIYDVIHDELYHAIKGEGAYMNDTLLPPLKDVA    150

BSNT_02442___    151 IEEAILAINATWVTENRRIDQSVLAPLVKRVRGTRSYGSAALELANVAAG    200
                     ||:||:.||.||..|:...|....|.||:.|||||:.||||||||.:|:|
BPUM_1365___s    151 IEKAIVGINPTWAIESPYFDAKPFARLVRDVRGTRTIGSAALELAYIASG    200

BSNT_02442___    201 RIDAYITMRLAPWDYAAGCVLLNEVGGIYTTIEGEPFTFLENHSVLAGNP    250
                     |.|||:|:||||||||||||||:|||.:|:.|.||..|||:.:|::|||.
BPUM_1365___s    201 RSDAYVTLRLAPWDYAAGCVLLDEVGAVYSNIHGERLTFLDKNSIVAGNR    250

BSNT_02442___    251 SIHKTIFEEYLHAGK---    265
                     |:.:.|..:|:...:   
BPUM_1365___s    251 SVCEKILHDYIKGSENKK    268


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