Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02359 and BPUM_1308

See DNA alignment / Visit BSNT_02359 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:50
# Commandline: needle
#    -asequence pep-align/BSNT_02359___ykzF.1.24716.seq
#    -bsequence pep-align/BPUM_1308___ykzF.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02359___ykzF-BPUM_1308___ykzF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02359___ykzF-BPUM_1308___ykzF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02359___ykzF
# 2: BPUM_1308___ykzF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 63
# Identity:      48/63 (76.2%)
# Similarity:    55/63 (87.3%)
# Gaps:           0/63 ( 0.0%)
# Score: 250.0
# 
#
#=======================================

BSNT_02359___      1 MSLIGERFTEEEQKLLLNILINHEYAIELLSSEINDIETGTKNVDGTTYK     50
                     ||:|..||.|||:|||||:|:|.|||:|||||||||||.||||||..|||
BPUM_1308___y      1 MSVIENRFNEEEKKLLLNVLLNQEYAVELLSSEINDIECGTKNVDDNTYK     50

BSNT_02359___     51 KLVTLYDRFRFEN     63
                     :|:|||||.||||
BPUM_1308___y     51 QLITLYDRVRFEN     63


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