Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00924 and BPUM_1020
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:37
# Commandline: needle
# -asequence pep-align/BSNT_00924.1.24716.seq
# -bsequence pep-align/BPUM_1020.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00924-BPUM_1020.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00924-BPUM_1020.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00924
# 2: BPUM_1020
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 533
# Identity: 159/533 (29.8%)
# Similarity: 264/533 (49.5%)
# Gaps: 88/533 (16.5%)
# Score: 549.5
#
#
#=======================================
BSNT_00924 1 MELSFLPKNT-FIDPN--GHNT------NEVKSLVDQLAGLVIEHSSHAA 41
|:.:..|.:: ||:.: |..: ..:.||:||.
BPUM_1020 1 MQSTKAPVDSLFINQSQLGRESFQAALHTSIDSLLDQW------------ 38
BSNT_00924 42 KRDTLP-----------AVES-FDYSDIPETGIEIENILVNL-QGIIKNS 78
::||.| :||| |.:. .:|..||::..:: :.::.:.
BPUM_1020 39 QKDTGPYSGILPGKLAASVESLFRFQ---PSGESIESVFQDIKEHLLPHL 85
BSNT_00924 79 MNPQNPRYMGHMDSIPTLISCLGDFISSSLNNNMLSLEMSPVFSKVEAQL 128
::..:|:.:.|:...|.:.:...:.:.||.|.:|.|.:.|.:.|.||.::
BPUM_1020 86 IDVSHPKCLAHLHCPPLIPALAAEVMVSSFNQSMDSFDQSGIASLVEEEI 135
BSNT_00924 129 LKTIARMFGYDDKSGGVMTSGGSLANLHALTVARN------HQLNMKKTG 172
||.:...|.|.|::.|..||||:.:|...|.:||: .|.|:::.|
BPUM_1020 136 LKWLCAKFSYVDQADGTFTSGGTQSNYMGLLLARDAFCENTWQWNVQQKG 185
BSNT_00924 173 IFGLSGQPVIFVSDVSHTSLHKAAMILGLGTSSIIPVKSNNLARMDIHDL 222
:...|.:..|..|..:|.::.|:|..||||..:::.|:::...|||::||
BPUM_1020 186 LPSESHRMRILCSKNAHFTVKKSASQLGLGEQAVVLVETDEHYRMDVNDL 235
BSNT_00924 223 EIKIHRAKSEGHIPFAVVATAGTTVTGSIDPILPIARITKENGLWLHVDA 272
:.|:...|.:..:|||||||.|||..|||||:..:..|.|..|||:|.||
BPUM_1020 236 KKKLVELKEQNLLPFAVVATCGTTDFGSIDPVREVYDIVKPYGLWIHADA 285
BSNT_00924 273 AYGGALIFSEKYRDKLSGIEMADSITFNPQKWMYITKTCAMTLFKNREIL 322
||||||:.||.||.||.|||:|||||.:..|..|...:|...|.|::
BPUM_1020 286 AYGGALVLSETYRKKLDGIELADSITIDFHKQFYQPISCGAFLLKDK--- 332
BSNT_00924 323 ETDFRI---SAPYMN----ETD-FINLGELGVQGTRHADILKLYLSLQHV 364
:.|.: .|.|:| |.| .::|....||.||..|.|||.|||:.:
BPUM_1020 333 -SHFGLINYHADYLNPKEDELDGILHLVNKSVQTTRRFDALKLLLSLRLI 381
BSNT_00924 365 GTKGYNQLINKSFALNEECIEQVKQRPFLE-LYCEPDTNICCFRGIPHDI 413
|.:|:.::|:.:....::..|.:::...|| :..||:.|...||
BPUM_1020 382 GEEGFGEIIDHTIHFAKDVAELIERNDDLEVINPEPEINAVVFR------ 425
BSNT_00924 414 EKD--QWDNWNLELQQFLLKEENIFLSLPEWKGNRWLRAVFLNPFITGSL 461
.|| |.|:.|..:.:.|.|.....::....:|...|:...|||..|.:.
BPUM_1020 426 FKDDHQTDDVNKIIHRTLFKRGTAVIAKTVVRGQTCLKFTLLNPRTTITH 475
BSNT_00924 462 IKQMFRKIDQFYDQYKQIV-------------- 480
|:::. ..||
BPUM_1020 476 IEEIL----------SDIVDIGIAHIQSGRVLR 498
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