Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01342 and BPUM_0775

See DNA alignment / Visit BSNT_01342 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:56
# Commandline: needle
#    -asequence pep-align/BSNT_01342___yfjM.1.24716.seq
#    -bsequence pep-align/BPUM_0775___yfjM.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01342___yfjM-BPUM_0775___yfjM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01342___yfjM-BPUM_0775___yfjM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01342___yfjM
# 2: BPUM_0775___yfjM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 154
# Identity:      88/154 (57.1%)
# Similarity:   111/154 (72.1%)
# Gaps:           4/154 ( 2.6%)
# Score: 473.0
# 
#
#=======================================

BSNT_01342___      1 MKRLCIIPCGKKKIWDVQPDAGPVRAEDAYLSPFHQACERYAKAFFDEWV     50
                     |||:||||||.||||||||:||...|...||||.||..:.||:.||.:|:
BPUM_0775___y      1 MKRVCIIPCGAKKIWDVQPEAGSQPANLVYLSPLHQRTKSYAQTFFSDWL     50

BSNT_01342___     51 ILSAKHGFLRPDDLVSGNYDVTFGTGHPEIMTADELSRQFHEKGFSDIEE    100
                     |:|||||||:.|:::..||||.||..|.:.||.:.||.|||||..:..:|
BPUM_0775___y     51 IISAKHGFLKADEIIHENYDVAFGIPHADQMTREGLSEQFHEKHLTAYDE    100

BSNT_01342___    101 LVMLGGKKYRSVLNAVIGEHQHISWPLSSYKGIGYMLQALNRAVEEKHEL    150
                     ||:|||||||.|::.::..||...:||:.|||||||||||.:|||.|.||
BPUM_0775___y    101 LVILGGKKYRKVIDPLLLPHQTAIYPLAPYKGIGYMLQALKQAVETKVEL    150

BSNT_01342___    150 ----    150
                         
BPUM_0775___y    151 PPHI    154


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