Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_01321 and BPUM_0737

See DNA alignment / Visit BSNT_01321 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:55
# Commandline: needle
#    -asequence pep-align/BSNT_01321___yfkI.1.24716.seq
#    -bsequence pep-align/BPUM_0737___yfkI.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01321___yfkI-BPUM_0737___yfkI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01321___yfkI-BPUM_0737___yfkI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01321___yfkI
# 2: BPUM_0737___yfkI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 110
# Identity:      43/110 (39.1%)
# Similarity:    70/110 (63.6%)
# Gaps:           4/110 ( 3.6%)
# Score: 239.0
# 
#
#=======================================

BSNT_01321___      1 -MNNERLMLKGIFLGAAAGAALSLLHKPTRQACGMRWLTCKHKLSLYKSN     49
                      ....:::|:|..||||.||.|:|.|:|||.|...:|..|:.||......
BPUM_0737___y      1 MEEKNQIVLRGALLGAACGALLTLFHRPTRIALKDKWNACQQKLEEVCQE     50

BSNT_01321___     50 PELLKNTVITKVDEAKKLAQTLSKEVDFVNQQVKELKKTTPQVMELVQET     99
                     |..:...:..|::|.|:|.:|:|.::.|:|:||.:||:|||:|:|:::||
BPUM_0737___y     51 PSRISTCMKEKMEETKQLMRTVSDDLSFLNEQVNQLKETTPRVLEIIEET    100

BSNT_01321___    100 KEHFSKK---    106
                     |:||..|   
BPUM_0737___y    101 KDHFQSKQTD    110


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.