Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00529 and BPUM_0271

See DNA alignment / Visit BSNT_00529 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:20
# Commandline: needle
#    -asequence pep-align/BSNT_00529___opuAB.1.24716.seq
#    -bsequence pep-align/BPUM_0271___opuAB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00529___opuAB-BPUM_0271___opuAB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00529___opuAB-BPUM_0271___opuAB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00529___opuAB
# 2: BPUM_0271___opuAB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 282
# Identity:     250/282 (88.7%)
# Similarity:   266/282 (94.3%)
# Gaps:           1/282 ( 0.4%)
# Score: 1262.0
# 
#
#=======================================

BSNT_00529___      1 MDRLPRIPLADIIDRFVDWITMTFGGFFDGIANGLAAFVNGIVTGLGFIP     50
                     |..|||||.||.||:||||:|:|||||||||.||||..|||||..||.||
BPUM_0271___o      1 MSDLPRIPFADYIDQFVDWLTLTFGGFFDGITNGLAGTVNGIVAALGVIP     50

BSNT_00529___     51 SILLTIIFAALAWWISTRGIALFTLIGFLLIDYLGYWDPMLQTLALVLTS    100
                     ||:||:|||.:||||||||:|||||||||||||||||.|||||||||||:
BPUM_0271___o     51 SIILTLIFAGIAWWISTRGVALFTLIGFLLIDYLGYWHPMLQTLALVLTA    100

BSNT_00529___    101 VIISIVVGVPIGIWASQKETVRRIVTPILDLMQTMPAFVYLLPAIFFFNI    150
                     |:||||:|||||||||||||||:|||||||||||||||||||||||||||
BPUM_0271___o    101 VVISIVIGVPIGIWASQKETVRKIVTPILDLMQTMPAFVYLLPAIFFFNI    150

BSNT_00529___    151 GVVPGVVASVIFAMPPTIRMTVLGIKQVPADLIEATEAFGSTTAQRLFKV    200
                     ||||||||||||:||||||||:|||||||:|||||||||||||.||||||
BPUM_0271___o    151 GVVPGVVASVIFSMPPTIRMTILGIKQVPSDLIEATEAFGSTTFQRLFKV    200

BSNT_00529___    201 QLPLATKTILAGINQSIMLALSMVVIAAMVGAPGLGSEVYSAVTQLKTGV    250
                     |||||||||||||||||||||||||||||||||||||||||||||||||:
BPUM_0271___o    201 QLPLATKTILAGINQSIMLALSMVVIAAMVGAPGLGSEVYSAVTQLKTGI    250

BSNT_00529___    251 GVEAGIAIVIVAITLDRITQNIKVKKKSRGNA    282
                     |.|||||||||||||||||||||. ||:||||
BPUM_0271___o    251 GFEAGIAIVIVAITLDRITQNIKT-KKTRGNA    281


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.