Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00434 and BPUM_0246
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:18
# Commandline: needle
# -asequence pep-align/BSNT_00434___ycbB.1.24716.seq
# -bsequence pep-align/BPUM_0246___ycbB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00434___ycbB-BPUM_0246___ycbB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00434___ycbB-BPUM_0246___ycbB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00434___ycbB
# 2: BPUM_0246___ycbB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 324
# Identity: 194/324 (59.9%)
# Similarity: 229/324 (70.7%)
# Gaps: 21/324 ( 6.5%)
# Score: 919.5
#
#
#=======================================
BSNT_00434___ 1 MRFFIADDDRAVRSILRQIIEDEDLGEAVGEADDGSQVEGHMLQFKQIDI 50
|||||||||||:||||.||||||||||.|.|||||..:|.|.|..|:|||
BPUM_0246___y 1 MRFFIADDDRAIRSILGQIIEDEDLGEVVDEADDGVGLEAHSLNLKKIDI 50
BSNT_00434___ 51 LLIDLLMPGRDGIETIRQIQNTYSGKIIMISQVEAKEMVGEAYSLGIEYF 100
||||||||.||||:|||.|...:.|||:||||||||||:.|||.|||||:
BPUM_0246___y 51 LLIDLLMPARDGIQTIRHIHPEFKGKIMMISQVEAKEMMAEAYELGIEYY 100
BSNT_00434___ 101 IHKPINRIEIVTVLQKVKERIELEHSIGAIQHSL----------SRLVNR 140
||||:||||||:|::||.|||:||.||..||.|| |.....
BPUM_0246___y 101 IHKPVNRIEIVSVIRKVIERIKLEKSIYDIQASLRHVLPLEPVISHHTTG 150
BSNT_00434___ 141 TERKARPQQKSDSGLKEAGTFLLSELGMMGEGGAHDLMAVLQYLAEHEQS 190
|..|.|. :||||.|||||||::||.|:.||:.:|.||.|.:.:
BPUM_0246___y 151 TGLKKRT-------MKEAGEFLLSELGIVGESGSKDLLEILIYLHETQSA 193
BSNT_00434___ 191 EPHEKQSPSLKQIFTQVAVRKLGTGASQTEVNREMKASEQRIRRAIIHSL 240
..||...|.|||:|.:.|.|||..||:..||.||:||:||||||||.|||
BPUM_0246___y 194 NSHEVNFPPLKQLFIKTAERKLDHGATDVEVMREVKAAEQRIRRAIHHSL 243
BSNT_00434___ 241 HHFASLGTTDFSNPKFETYASKFFDFPVVSQKIKELQSKDAKPLAPARIN 290
:||||||.|||||||||.||||||||..|||::||:|.......:..|:|
BPUM_0246___y 244 NHFASLGLTDFSNPKFEHYASKFFDFTDVSQRMKEMQKTSPSAGSTGRVN 293
BSNT_00434___ 291 MKKFIHVFFLEAKLLHETMKQRRI 314
.|||:.:|:.|||.|.|.|.
BPUM_0246___y 294 TKKFVQIFYFEAKQLFEGMS---- 313
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