Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00006 and BPUM_0006
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:20:56
# Commandline: needle
# -asequence pep-align/BSNT_00006___gyrB.1.24716.seq
# -bsequence pep-align/BPUM_0006___gyrB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00006___gyrB-BPUM_0006___gyrB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00006___gyrB-BPUM_0006___gyrB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00006___gyrB
# 2: BPUM_0006___gyrB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 642
# Identity: 584/642 (91.0%)
# Similarity: 613/642 (95.5%)
# Gaps: 4/642 ( 0.6%)
# Score: 3035.0
#
#
#=======================================
BSNT_00006___ 1 ----MEQQQNSYDENQIQVLEGLEAVRKRPGMYIGSTNSKGLHHLVWEIV 46
||||.||||||||||||||||||||||||||||::|||||||||||
BPUM_0006___g 1 MYVAMEQQHNSYDENQIQVLEGLEAVRKRPGMYIGSTSAKGLHHLVWEIV 50
BSNT_00006___ 47 DNSIDEALAGYCTDINIQIEKDNSITVVDNGRGIPVGIHEKMGRPAVEVI 96
|||||||||||||||.:||||||||||.||||||||||||||||||||||
BPUM_0006___g 51 DNSIDEALAGYCTDITVQIEKDNSITVKDNGRGIPVGIHEKMGRPAVEVI 100
BSNT_00006___ 97 MTVLHAGGKFDGSGYKVSGGLHGVGASVVNALSTELDVTVHRDGKIHRQT 146
||||||||||||||||||||||||||||||||||.|||||:||||||.|.
BPUM_0006___g 101 MTVLHAGGKFDGSGYKVSGGLHGVGASVVNALSTTLDVTVYRDGKIHYQQ 150
BSNT_00006___ 147 YKRGVPVTDLEIIGETDHTGTTTHFVPDPEIFSETTEYDYDLLANRVREL 196
:||||||.|||||||||.||||||||||||||:||.|:|||.||||||||
BPUM_0006___g 151 FKRGVPVGDLEIIGETDVTGTTTHFVPDPEIFTETIEFDYDTLANRVREL 200
BSNT_00006___ 197 AFLTKGVNITIEDKREGQERKNEYHYEGGIKSYVEYLNRSKEVVHEEPIY 246
|||||||||.|||.|||:||:|||.||||||||||:||||||||||||:|
BPUM_0006___g 201 AFLTKGVNIIIEDLREGKERRNEYCYEGGIKSYVEHLNRSKEVVHEEPVY 250
BSNT_00006___ 247 IEGEKDGITVEVALQYNDSYTSNIYSFTNNINTYEGGTHEAGFKTGLTRV 296
||||:||||||||||||||||||||||.||||||||||||||||||||||
BPUM_0006___g 251 IEGERDGITVEVALQYNDSYTSNIYSFANNINTYEGGTHEAGFKTGLTRV 300
BSNT_00006___ 297 INDYARKKGLIKENDPNLSGDDVREGLTAIISIKHPDPQFEGQTKTKLGN 346
|||||||.|:.|:.|.||||:|||||||||||||||||||||||||||||
BPUM_0006___g 301 INDYARKNGVFKDGDSNLSGEDVREGLTAIISIKHPDPQFEGQTKTKLGN 350
BSNT_00006___ 347 SEARTITDTLFSTAMETFMLENPDAAKKIVDKGLMAARARMAAKKARELT 396
||||||||:|||.|:|.|:|||||||||||:||:||||||||||||||||
BPUM_0006___g 351 SEARTITDSLFSEALEKFLLENPDAAKKIVEKGVMAARARMAAKKARELT 400
BSNT_00006___ 397 RRKSALEISNLPGKLADCSSKDPSISELYIVEGDSAGGSAKQGRDRHFQA 446
|||||||:|:||||||||||||||||||||||||||||||||||||||||
BPUM_0006___g 401 RRKSALEVSSLPGKLADCSSKDPSISELYIVEGDSAGGSAKQGRDRHFQA 450
BSNT_00006___ 447 ILPLRGKILNVEKARLDKILSNNEVRSMITALGTGIGEDFNLEKARYHKV 496
||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_0006___g 451 ILPLRGKILNVEKARLDKILSNNEVRSMITALGTGIGEDFNLEKARYHKV 500
BSNT_00006___ 497 VIMTDADVDGAHIRTLLLTFFYRYMRQIIENGYVYIAQPPLYKVQQGKRV 546
||||||||||||||||||||||||||:|||||||||||||||||||||||
BPUM_0006___g 501 VIMTDADVDGAHIRTLLLTFFYRYMREIIENGYVYIAQPPLYKVQQGKRV 550
BSNT_00006___ 547 EYAYNDKELEELLKTLPQTPKPGLQRYKGLGEMNATQLWETTMDPSSRTL 596
||.||||:|:||||:|.||||||||||||||||||.|||||||||.:|||
BPUM_0006___g 551 EYVYNDKQLDELLKSLSQTPKPGLQRYKGLGEMNAAQLWETTMDPDARTL 600
BSNT_00006___ 597 LQVTLEDAMDADETFEMLMGDKVEPRRNFIEANARYVKNLDI 638
||||||||:||||||||||||||||||||||.||:|||||||
BPUM_0006___g 601 LQVTLEDAIDADETFEMLMGDKVEPRRNFIEENAQYVKNLDI 642
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