Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05469 and BL05353

See DNA alignment / Visit BSNT_05469 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:36
# Commandline: needle
#    -asequence pep-align/BSNT_05469___ywtC.1.5803.seq
#    -bsequence pep-align/BL05353___pgsE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05469___ywtC-BL05353___pgsE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05469___ywtC-BL05353___pgsE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05469___ywtC
# 2: BL05353___pgsE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 56
# Identity:      28/56 (50.0%)
# Similarity:    41/56 (73.2%)
# Gaps:           2/56 ( 3.6%)
# Score: 156.0
# 
#
#=======================================

BSNT_05469___      1 MKFVKAIWPFVAVAIVFMFMSAFKFNDQLTDQEKQKIDMEMNKIQQQEEP     50
                     ||||:||||||.:.::..||||||::|:|::.||.||..|:.|:.||:: 
BL05353___pgs      1 MKFVRAIWPFVGLVLIIAFMSAFKYSDELSNDEKAKISTEIQKVNQQDQ-     49

BSNT_05469___     51 VNANK-     55
                     ...|| 
BL05353___pgs     50 TTENKQ     55


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