Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05879 and BL03853

See DNA alignment / Visit BSNT_05879 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:57
# Commandline: needle
#    -asequence pep-align/BSNT_05879___ywaF.1.5803.seq
#    -bsequence pep-align/BL03853___ywaF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05879___ywaF-BL03853___ywaF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05879___ywaF-BL03853___ywaF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05879___ywaF
# 2: BL03853___ywaF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 246
# Identity:     130/246 (52.8%)
# Similarity:   171/246 (69.5%)
# Gaps:           9/246 ( 3.7%)
# Score: 681.0
# 
#
#=======================================

BSNT_05879___      1 MQKYVQSDYKHDPFHLFSTEHVVTLAIIALLAILLFLFQDGVKQPRASRF     50
                     |:.|.|.||:...|.|||..|:|||.:||.|.:.||:|:..:::|..:|.
BL03853___ywa      1 MKTYFQKDYQLGSFQLFSASHIVTLLVIAALGVCLFVFRKTLQKPEWNRL     50

BSNT_05879___     51 LRSLFVFLLLGSQIGYQIWMVATGRWSVRTSLPLQLSDLSVYLSAIMLVT    100
                     :|.:||.:|:.|:|||..|.|....|:.|..|||.||||||||..|:|:|
BL03853___ywa     51 IRYVFVAVLIISEIGYHSWFVYVNSWTPRYCLPLHLSDLSVYLVIILLLT    100

BSNT_05879___    101 KSRKLFVFLFFAGIGSSIQALATPDLGMFSFPHIRYILFFISHGSVFLSC    150
                     |:..||.||:|||:||::||:.|||||.:.|||.|:..||||||.|.|:|
BL03853___ywa    101 KNLNLFKFLYFAGLGSALQAILTPDLGRYGFPHFRFFEFFISHGIVVLAC    150

BSNT_05879___    151 LLMAVIGTNRMGQRSLWVTVLLVNVYGVCIFLIDRWLGANYMYLTKKP-G    199
                     |||......:...||||||.|||||||..||||:|.|.:||||:.||| |
BL03853___ywa    151 LLMIAAERYKPTVRSLWVTFLLVNVYGALIFLINRLLNSNYMYMMKKPGG    200

BSNT_05879___    200 GSSLLDVLGPWPWYIVSAEAITVASFFILYMLYRIFKK--------    237
                     |:||||||||||||::||||:|:..|::||:.:.|..|        
BL03853___ywa    201 GASLLDVLGPWPWYLLSAEAVTIVFFYLLYLPFWIAGKVREKKDHA    246


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