Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02264 and BL03529

See DNA alignment / Visit BSNT_02264 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:46
# Commandline: needle
#    -asequence pep-align/BSNT_02264___sigI.1.5803.seq
#    -bsequence pep-align/BL03529___sigI.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02264___sigI-BL03529___sigI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02264___sigI-BL03529___sigI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02264___sigI
# 2: BL03529___sigI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 251
# Identity:     208/251 (82.9%)
# Similarity:   236/251 (94.0%)
# Gaps:           0/251 ( 0.0%)
# Score: 1060.0
# 
#
#=======================================

BSNT_02264___      1 MKPVLSLLFKLGKKKQTLEKAVESIQKGNKDLQNELIQQYKPFIAKTVSS     50
                     ||||||||||.||:||:||::|.||||||:.||||||.|||||:||||||
BL03529___sig      1 MKPVLSLLFKTGKRKQSLEESVISIQKGNQQLQNELIDQYKPFVAKTVSS     50

BSNT_02264___     51 VCKRYIDEKDDEFSIGLIAFNEAIEKYSPEKGNSLLAFAELIIKRKVIDY    100
                     ||||||||||||||||||||||||||||.:||||||||||||||||||||
BL03529___sig     51 VCKRYIDEKDDEFSIGLIAFNEAIEKYSSDKGNSLLAFAELIIKRKVIDY    100

BSNT_02264___    101 IRKEARSAQNINIDLQEGDDQESSQSLIEAELSIDEYRRQIEQEQRREEI    150
                     ||||||:|||||:|:|||::||||||:|||||||.|:.|.:|||||||||
BL03529___sig    101 IRKEARNAQNINMDMQEGEEQESSQSMIEAELSIHEFNRMLEQEQRREEI    150

BSNT_02264___    151 LYFQKQLKDYGLSFKELLENSPKHTDARQNAIKVAMTLVEHEELAAILYT    200
                     |:|:::||.:||||.:|||:|||||||||||||||.||||||||..||:.
BL03529___sig    151 LHFKERLKSFGLSFSDLLEHSPKHTDARQNAIKVAYTLVEHEELKKILFE    200

BSNT_02264___    201 KKQLPVKQLEQLVSVSRKTIERNRKYIIAMCIIITGDYIYLKDYLKGVLH    250
                     ||||||||||:||:|||||:||||||||||.|||||||:||||||||||:
BL03529___sig    201 KKQLPVKQLEKLVAVSRKTVERNRKYIIAMAIIITGDYVYLKDYLKGVLN    250

BSNT_02264___    251 S    251
                     |
BL03529___sig    251 S    251


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