Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05307 and BL03411

See DNA alignment / Visit BSNT_05307 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:24
# Commandline: needle
#    -asequence pep-align/BSNT_05307___hisA.1.5803.seq
#    -bsequence pep-align/BL03411___hisA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05307___hisA-BL03411___hisA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05307___hisA-BL03411___hisA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05307___hisA
# 2: BL03411___hisA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 245
# Identity:     191/245 (78.0%)
# Similarity:   218/245 (89.0%)
# Gaps:           0/245 ( 0.0%)
# Score: 985.0
# 
#
#=======================================

BSNT_05307___      1 MSAFTLYPAIDMRNGKCVRLVQGDYNKETIYGDSPYDMAELFAKEGAEWI     50
                     ||.||:|||||:||||||||:||||.||||||.||.:||..||:|||.||
BL03411___his      1 MSEFTVYPAIDIRNGKCVRLIQGDYEKETIYGHSPLEMASRFAEEGASWI     50

BSNT_05307___     51 HLVDLDGAKEGKRVNDRHVIEIAQKLNLKVEIGGGIRSEKDVYEYLSAGV    100
                     ||||||||:|||:||..|||.||.||::||::|||||:|||||:|||.||
BL03411___his     51 HLVDLDGAREGKKVNGGHVISIADKLDVKVQVGGGIRTEKDVYDYLSQGV    100

BSNT_05307___    101 DRVILGSSAVSNPPFVKKMLKQYGEKIAIGLDARNGFVSTEGWLETSTLK    150
                     :|||||||||||..|||||||.||..||||||||:||||||||||||:::
BL03411___his    101 ERVILGSSAVSNTEFVKKMLKAYGGHIAIGLDARDGFVSTEGWLETSSVR    150

BSNT_05307___    151 ATELGKELANEGAEVFIFTDIATDGMLSGPNVKSTVELAKETGKSVIASG    200
                     |.|||:|||||||||||||||||||||||||:.||||||:.|||.|||||
BL03411___his    151 AEELGRELANEGAEVFIFTDIATDGMLSGPNINSTVELARATGKQVIASG    200

BSNT_05307___    201 GVSSVTDLEALARYEADGVSGAIIGKALYTNQFTLSEALERVKRK    245
                     ||||:.||||||...::||||||:||||||||||::||||||..|
BL03411___his    201 GVSSLADLEALASRASEGVSGAIVGKALYTNQFTVAEALERVAAK    245


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