Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05105 and BL03052

See DNA alignment / Visit BSNT_05105 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:13
# Commandline: needle
#    -asequence pep-align/BSNT_05105.1.5803.seq
#    -bsequence pep-align/BL03052___yvaP.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05105-BL03052___yvaP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05105-BL03052___yvaP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05105
# 2: BL03052___yvaP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 116
# Identity:      65/116 (56.0%)
# Similarity:    84/116 (72.4%)
# Gaps:          12/116 (10.3%)
# Score: 336.0
# 
#
#=======================================

BSNT_05105         1 MNQSEMCPRFEKAVDILSKRWVALIVFQLLNGSQRFSEIEAALPNLSGRV     50
                     |:.|.:||:|||.:.::|:||...|:.|||||.|||..||::|| :|||:
BL03052___yva      1 MSLSSLCPKFEKGMKMISQRWNGFIIHQLLNGPQRFCHIESSLP-ISGRL     49

BSNT_05105        51 LSERLKELELEGVVKRDVIPETPVRIEYSLTDKGKALAPILGEISKWATE    100
                     |||||||||.||::.|.|.||||||||||||:||:||.|:|..:.||:.|
BL03052___yva     50 LSERLKELEHEGIIHRHVYPETPVRIEYSLTEKGQALEPVLKGMEKWSQE     99

BSNT_05105       101 WIDPSFLD--------    108
                     |||   ||        
BL03052___yva    100 WID---LDEANERENH    112


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