Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00757 and BL02923

See DNA alignment / Visit BSNT_00757 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:23
# Commandline: needle
#    -asequence pep-align/BSNT_00757___ydbA.1.5803.seq
#    -bsequence pep-align/BL02923___ydbA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00757___ydbA-BL02923___ydbA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00757___ydbA-BL02923___ydbA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00757___ydbA
# 2: BL02923___ydbA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 276
# Identity:     190/276 (68.8%)
# Similarity:   227/276 (82.2%)
# Gaps:           6/276 ( 2.2%)
# Score: 1003.0
# 
#
#=======================================

BSNT_00757___      1 MPTERKEDLHQQLKEIEKWEKDQQKVWFWEKLSRLPFQLLDKLTPEFIQK     50
                      ....|.||..:||:||||||:|||.||||::.||||::||||||.|||.
BL02923___ydb      1 -MRYDKTDLENELKKIEKWEKEQQKAWFWERIGRLPFKVLDKLTPAFIQD     49

BSNT_00757___     51 KIGKLLDEVGSFVQTGGQYLTSEKQIIRMFQKKLPEEIFESLEDIRKAPL    100
                     |||.||||:|.|:|.|||||||||.:||.||||||:|..|::|||:.|||
BL02923___ydb     50 KIGLLLDEIGGFIQNGGQYLTSEKHLIRQFQKKLPDETIETIEDIQWAPL     99

BSNT_00757___    101 PVMDEIAEGMGKNRTNAATVQGATTGVGGVFTLAADIPAVLGLSLKTLQD    150
                     .|||:|.|.:||||.|.|.||||||||||:||||.||||:||||||||||
BL02923___ydb    100 EVMDQICENLGKNRANTAAVQGATTGVGGLFTLAVDIPAILGLSLKTLQD    149

BSNT_00757___    151 IAVAYGYDPKEKKERVFIVKCLQLTSADVVGKRSILQELKHYDQ-DRTYK    199
                     |||:||||||||.||:||:|||||::||:||||:|:|||..|.| ..:.:
BL02923___ydb    150 IAVSYGYDPKEKTERMFIIKCLQLSAADIVGKRAIIQELSRYHQPSGSRE    199

BSNT_00757___    200 NVASQIQGWREVVLGYRDTFGWKKLFQMVPVAGMVFGAAANRSTLNDITE    249
                     |:.||||||||||..|||:||||||||||||||::|||.:|||.:|.:.|
BL02923___ydb    200 NMISQIQGWREVVYTYRDSFGWKKLFQMVPVAGILFGAISNRSMVNGVAE    249

BSNT_00757___    250 TGMMLYKKRRILERLKE---TEREME    272
                     ||||:||||||:|||.|   ||.|. 
BL02923___ydb    250 TGMMMYKKRRIMERLAELDATETEG-    274


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