Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04187 and BL02365

See DNA alignment / Visit BSNT_04187 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:16
# Commandline: needle
#    -asequence pep-align/BSNT_04187___ysfB.1.5803.seq
#    -bsequence pep-align/BL02365.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04187___ysfB-BL02365.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04187___ysfB-BL02365.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04187___ysfB
# 2: BL02365
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 384
# Identity:      96/384 (25.0%)
# Similarity:   182/384 (47.4%)
# Gaps:          28/384 ( 7.3%)
# Score: 320.0
# 
#
#=======================================

BSNT_04187___      1 -MFLQPLLAKKIIAEVKKMYEREVIIVNTDGLIMAGTNDERVGQFHEGAL     49
                      .:|...||::|:.....:....:.:::.:|:|:|..:..|:|..|.||.
BL02365            1 MNYLSKELAEEIVERTMSIIRHNINMMDENGVIIASGDRSRIGDEHAGAK     50

BSNT_04187___     50 ICAKERRSVIITKEDETRLKGVKAGINLPVFFDHDVIAVFGLTGEPAEIQ     99
                     ......:.:.||.|:.:.|.|.|.|:|||:.|..::|.|.|:||.|:|:.
BL02365           51 DALAAEKVISITPEECSALTGTKPGVNLPIVFHDEIIGVIGITGPPSEVS    100

BSNT_04187___    100 PFGELLRKMTELFIKESRHLEQSQWRERMLESFMIDWLQLKEW-SPSFLE    148
                     .:|||::...||.::::...:|..|.:|:.|..:|..:|..:. |..|.|
BL02365          101 RYGELVKMAAELTVEQAFLTKQLTWDQRLREETVIQMIQGTDLASLDFFE    150

BSNT_04187___    149 KAQLLGVDLSSRRQMILIQ--GYEWSPHDIEQMAR--SWKSSYPADLFIR    194
                     :|:.|.:.|..:|..::.:  ..:..|..|:::.:  :.|..| |::.::
BL02365          151 RAERLNIPLDGQRTCLVFELPSADMKPAFIKKLEKHLTAKDLY-ANISLK    199

BSNT_04187___    195 WGNERILINHEVPQHEQRDRLLRKILHICSFANTASSQY-TAAGA--GRA    241
                        |..:|....|...:.|        :.|..|...||: |..||  .:|
BL02365          200 ---EVAVILAGAPTKSRSD--------LFSAWNGWLSQWKTVRGALGEQA    238

BSNT_04187___    242 VASSSLTDSYEQAEKALAVSLKRKTPIFEEDLKLDMCLTEISPGTRNEFP    291
                     .....|..||:.|::.|.::....:.....:..:.:.|::|....:....
BL02365          239 DQLQQLPFSYQSAKQTLKIAENNCSLYDYREFAIPVLLSKIEHPDQEIHF    288

BSNT_04187___    292 QRV---LGEALEHQELMNTLRTFFHHDLSLKQTAEDMHIHINTLRYRLAK    338
                     |.:   |.:|.:..||.:||..:...:..:.:|:..:.||.|||.|||.|
BL02365          289 QNIWDRLSQADQKGELTHTLLCYIEENGEIGETSSRLFIHRNTLNYRLRK    338

BSNT_04187___    339 AEQLTGLRFDRTEDIVTMYVALYFLDQDTK----    368
                     .|..||....|.:|:..:|.|:........    
BL02365          339 IELATGCNPKRFDDLFKLYTAITLFSPFCANEQF    372


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