Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00772 and BL02190

See DNA alignment / Visit BSNT_00772 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:24
# Commandline: needle
#    -asequence pep-align/BSNT_00772___ydbK.1.5803.seq
#    -bsequence pep-align/BL02190___ydbK.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00772___ydbK-BL02190___ydbK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00772___ydbK-BL02190___ydbK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00772___ydbK
# 2: BL02190___ydbK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 255
# Identity:     143/255 (56.1%)
# Similarity:   192/255 (75.3%)
# Gaps:           0/255 ( 0.0%)
# Score: 765.0
# 
#
#=======================================

BSNT_00772___      1 MSKLIWNEHMKLFNRKVTLVSLILMAVFQFFMALIIKRIVISAGTDENFI     50
                     |.|||.|||:||..||||.|||.|:.||||.:|||.|||::.||.:::||
BL02190___ydb      1 MFKLIQNEHVKLLKRKVTFVSLALIVVFQFLLALITKRILMGAGAEDHFI     50

BSNT_00772___     51 GYLSYTPSLNILLQALTIVIAATIVSMEFDKKTIKFLLIRPVKRQKVFWS    100
                     ||.|:||:||||||.|:||:||:|:|.|:|||||||||||||:|:|:..|
BL02190___ydb     51 GYFSFTPNLNILLQGLSIVVAASIISFEYDKKTIKFLLIRPVRREKILVS    100

BSNT_00772___    101 KLITVVMVSFYLYLAYYILALLFGLVFFGTSVTAESKTLLVNTLALIGSN    150
                     |.:|.|:.|.:|::.||..::||||:|||..:..:::.|.:||:.:||:.
BL02190___ydb    101 KYVTSVLASIWLFIIYYGFSILFGLLFFGVKLDEKAEPLFINTVKMIGTQ    150

BSNT_00772___    151 WLEAVMMGLFGLLCSSLFRNSAVAVVVSFVVLYGASTLVQLMKLFENKWG    200
                     |.|..||..|..|||:||::||::::||.||||||..||.:|...|...|
BL02190___ydb    151 WFEVWMMVSFAFLCSALFKSSALSIMVSIVVLYGAKMLVTIMAYLEKPLG    200

BSNT_00772___    201 SFLLFANTDFTQYGSGETALFSGMTPLFSIGILIIHAIFFIVVGWWCFCK    250
                     .||||||||.|||......||:|||||||:.|:.||.:||:...||.|||
BL02190___ydb    201 KFLLFANTDLTQYAGEAKPLFAGMTPLFSLFIVFIHLVFFLGTAWWGFCK    250

BSNT_00772___    251 RDVRV    255
                     ||::|
BL02190___ydb    251 RDMKV    255


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.