Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03964 and BL02023
See
DNA alignment /
Visit
BSNT_03964 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:59
# Commandline: needle
# -asequence pep-align/BSNT_03964___yrrR.1.5803.seq
# -bsequence pep-align/BL02023.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03964___yrrR-BL02023.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03964___yrrR-BL02023.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03964___yrrR
# 2: BL02023
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 584
# Identity: 413/584 (70.7%)
# Similarity: 481/584 (82.4%)
# Gaps: 0/584 ( 0.0%)
# Score: 2163.0
#
#
#=======================================
BSNT_03964___ 1 MKISKRMKLAVIAFLIVFFLLLLRLAEIQLFFTESFSKKKINLIQESVKQ 50
||..||||...|........||:|||||||||||||||:.:|||||||||
BL02023 1 MKWQKRMKWVSIIISAALLFLLIRLAEIQLFFTESFSKRNVNLIQESVKQ 50
BSNT_03964___ 51 RTEEVLISDGRGSFLDRNGRALTGQSEPAVVLFPFLLTQDWPIKKVADIL 100
|||||.|||||||||||||..|:...:||:||||||..|.||.|:.|:||
BL02023 51 RTEEVRISDGRGSFLDRNGEHLSVSQKPAIVLFPFLKNQPWPAKEAAEIL 100
BSNT_03964___ 101 GMSEDNLRQTLGQAKKPVILQQKKIKTLSKQSITKINSLKYPGIYGVYME 150
.|:||.|...|..|||||||.:....::||.::.|||.|||||:||||:|
BL02023 101 NMTEDELGSKLDHAKKPVILTKHDGASVSKTALEKINKLKYPGVYGVYIE 150
BSNT_03964___ 151 NEDKPSLASHTIGSTNQDPALLRKKYPDKGSLPITTEIGTTGLERTFDEF 200
..:|..|||||:|.|||||.|||:|||||..|.|:|:|||.|:|||||||
BL02023 151 ETEKNRLASHTLGMTNQDPDLLRRKYPDKEGLSISTKIGTFGMERTFDEF 200
BSNT_03964___ 201 LLPEQDTKLLYHVDGKGNPLFGMDVKYTAEANTFYPLQVKTTIDQSIQKA 250
|||||||||||||||.|||||||||||||:||.|||||||||:|:.:|:|
BL02023 201 LLPEQDTKLLYHVDGLGNPLFGMDVKYTADANPFYPLQVKTTLDKKVQQA 250
BSNT_03964___ 251 MEEVLDEQGLKKGGAVLLDIENSSVLGIVSKPDADVSRQNTLQNYMLTPI 300
||:|||:..|.||.|||||||.:.|:.|.||||.:::.|.|.|||||||:
BL02023 251 MEDVLDDHQLDKGWAVLLDIETNGVVAIASKPDLNMAAQKTRQNYMLTPV 300
BSNT_03964___ 301 YPGSVFKTVIAAAAIENNMVKPSQTFNCNFNLYGEPGDDKGTLSFDESFA 350
|||||||||||||||||.:..||:|||||.|||||.|:|||.||.::|||
BL02023 301 YPGSVFKTVIAAAAIENGLDHPSKTFNCNLNLYGEAGEDKGKLSLEDSFA 350
BSNT_03964___ 351 QSCNYTFTSLAEQLMKKDSSVIEDMSEKLALTDRAGWEGKLYHETDFRQL 400
:|||||||:||.||::|:||||||.:.||.||.|.|||||||||.:|||.
BL02023 351 ESCNYTFTNLAGQLVEKNSSVIEDTAAKLGLTGRVGWEGKLYHEDEFRQF 400
BSNT_03964___ 401 YNEKSGVIWGDEKDKSVKKAIAQTAIGQKNVKVTPLEVANMMATIARGGE 450
|:|.:|.||||||||.||||:|||||||||||:||||:.|||||||||||
BL02023 401 YHETAGSIWGDEKDKKVKKAVAQTAIGQKNVKLTPLEIVNMMATIARGGE 450
BSNT_03964___ 451 KRQVKIAEQIEYKNGTTLVTFKDQKLKGETIDKYTSQQLQKILRRVVESP 500
|:|||||:||||||||.:..|||.:|.||.||:||:|:|||:||:||.|.
BL02023 451 KKQVKIADQIEYKNGTLMTAFKDHELPGEKIDQYTAQKLQKLLRKVVTSE 500
BSNT_03964___ 501 SGTGRRFQDLPYTVAGKSGTAQTGKLSKEKETLYEKWFAGYFPADKPKYA 550
.||||||.||||.|||||||||||:.:.:|:|||.|||||||||||||||
BL02023 501 KGTGRRFSDLPYDVAGKSGTAQTGRTTDDKKTLYHKWFAGYFPADKPKYA 550
BSNT_03964___ 551 LVVLHMDTPGDKALTNSVFYDIVKKVHEIEINQK 584
|||:|||||..||.||:|||||||||:|||.||.
BL02023 551 LVVVHMDTPDSKAATNAVFYDIVKKVYEIEKNQT 584
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.