Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00689 and BL01868

See DNA alignment / Visit BSNT_00689 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:19
# Commandline: needle
#    -asequence pep-align/BSNT_00689___glcU.1.5803.seq
#    -bsequence pep-align/BL01868___glcU.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00689___glcU-BL01868___glcU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00689___glcU-BL01868___glcU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00689___glcU
# 2: BL01868___glcU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 287
# Identity:     226/287 (78.7%)
# Similarity:   253/287 (88.2%)
# Gaps:           2/287 ( 0.7%)
# Score: 1154.0
# 
#
#=======================================

BSNT_00689___      1 MDLLLALLPALFWGSIVLFNVKLGGGPYSQTLGTTIGALIVSIVIYFFVQ     50
                     ||:.||:|||:|||||||||||||||||||.||||.||||.||.|||.||
BL01868___glc      1 MDIFLAILPAIFWGSIVLFNVKLGGGPYSQVLGTTFGALIFSIGIYFVVQ     50

BSNT_00689___     51 PVLSLRIFIVGIVSGLFWSLGQANQLKSIQLMGVSKTMPISTGMQLVSTS    100
                     |.||.|||.||:||||||:|||.||||||.|:|||||||||||:||||||
BL01868___glc     51 PELSPRIFAVGVVSGLFWALGQTNQLKSIDLIGVSKTMPISTGLQLVSTS    100

BSNT_00689___    101 LFGVIVFREWSTPIAITLGVLALIFIIVGIILTSLEDKNDKKEGEPSNLK    150
                     ||||:||.||:|.|:|.|||||||||||||:||||||::.|.|.:..::|
BL01868___glc    101 LFGVLVFHEWATTISIVLGVLALIFIIVGIVLTSLEDRSQKTEEKTGDMK    150

BSNT_00689___    151 KGILILLVSTLGYLVYVVVARLFNVSGWSALLPQAIGMVVGGLVLTYRHK    200
                     |||:|||:||.||||||||.|||:||||:||.|||:|||.|||:||:|||
BL01868___glc    151 KGIVILLISTFGYLVYVVVVRLFDVSGWAALFPQAVGMVAGGLILTFRHK    200

BSNT_00689___    201 PFNKYAIRNILPGLIWAGGNMFLFISQPRVGVATSFSLSQMGIVISTLGG    250
                     |||.|.|:||:||||||.||||||||||||||||||||||||||||||||
BL01868___glc    201 PFNFYVIKNIIPGLIWAAGNMFLFISQPRVGVATSFSLSQMGIVISTLGG    250

BSNT_00689___    251 IFILREKKTKRQLIAIAIGIILIIAAAVFLGIAKTNS    287
                     |.:|.|||||||||.||||||||:||.|.|||||.  
BL01868___glc    251 IILLGEKKTKRQLIGIAIGIILIVAAGVLLGIAKA--    285


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