Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04008 and BL01130

See DNA alignment / Visit BSNT_04008 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:03
# Commandline: needle
#    -asequence pep-align/BSNT_04008___yrvD.1.5803.seq
#    -bsequence pep-align/BL01130___yrvD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04008___yrvD-BL01130___yrvD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04008___yrvD-BL01130___yrvD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04008___yrvD
# 2: BL01130___yrvD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 107
# Identity:      62/107 (57.9%)
# Similarity:    77/107 (72.0%)
# Gaps:          10/107 ( 9.3%)
# Score: 300.0
# 
#
#=======================================

BSNT_04008___      1 MNKQWTIIFALIFTLIVAIFAVINVRSVEVDYLFGRSEWPLILVILGSVL     50
                     ||||||:|.|||||||||:||||||..|:||:|||.:|||||||||.|||
BL01130___yrv      1 MNKQWTLIAALIFTLIVAVFAVINVEPVKVDFLFGTAEWPLILVILVSVL     50

BSNT_04008___     51 MGALIVFSVGIFQVMKLKREIKTLRKENRTAIHKQEDTHLADQTDTQDAS    100
                     |||||:.|.|.||:|:||:|:|.|:||.| |.|.:.:...|...:.:|  
BL01130___yrv     51 MGALIIGSAGAFQIMRLKKELKALKKEER-AKHPELEAEPAAPENQKD--     97

BSNT_04008___    101 AMIEKKD    107
                            
BL01130___yrv     97 -------     97


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