Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00132 and BL00860

See DNA alignment / Visit BSNT_00132 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:48
# Commandline: needle
#    -asequence pep-align/BSNT_00132___pabC.1.5803.seq
#    -bsequence pep-align/BL00860___pabC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00132___pabC-BL00860___pabC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00132___pabC-BL00860___pabC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00132___pabC
# 2: BL00860___pabC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 297
# Identity:     167/297 (56.2%)
# Similarity:   214/297 (72.1%)
# Gaps:          15/297 ( 5.1%)
# Score: 885.0
# 
#
#=======================================

BSNT_00132___      1 -MIYVNGRYMEEKDAVLSPFDHGFLYGIGVFETFRLYEGCPFLLDWHIER     49
                      :||:||:|::|::|.|||||||||||:|||||||||||.|||||||::|
BL00860___pab      1 MIIYLNGQYVKEEEARLSPFDHGFLYGVGVFETFRLYEGKPFLLDWHMDR     50

BSNT_00132___     50 LERALKDLQIEYTVSKHEILEMLDKLLKLNDIKDGNARVRLNISAGISDK     99
                     |..||:.|:||..::|.|:|.:||:||:||..::.:||||||||||....
BL00860___pab     51 LNNALEQLKIELELTKSEVLVILDRLLQLNQPQNLDARVRLNISAGPGGP    100

BSNT_00132___    100 GFVAQTYDKPTVLCFVNQLKPESLPLQKEGKVLSIRRNTPEGSFRLKSHH    149
                     |....:|..|.|:..:|..:|.|:|.:|||.:|.:|||||||.|||||||
BL00860___pab    101 GLFPDSYKNPGVMVMMNPFQPASVPAEKEGVILQVRRNTPEGPFRLKSHH    150

BSNT_00132___    150 YLNNMYAKREIGNDPRVEGIFLTEDGAVAEGIISNVFWRKGRCIYTPSLD    199
                     :|||:|.|||:|:|...|||||||.||||||||||||||||.|:||||||
BL00860___pab    151 FLNNLYGKRELGHDAAKEGIFLTEGGAVAEGIISNVFWRKGSCVYTPSLD    200

BSNT_00132___    200 TGILDGVTRRFIIENAKNIGLELKTGRYELEALLTADEAWMTNSVLEIIP    249
                     ||||.|||||::||...::|:|:..|.|.||.||.||||||||||.||:|
BL00860___pab    201 TGILGGVTRRYVIERLADMGIEVIEGVYPLEELLFADEAWMTNSVQEIVP    250

BSNT_00132___    250 FTKIEEVNYGSQSGEATSALQLLY---KKEIKNMIHEKGGRAWRSTQ    293
                     |.:|....:..:.|..:..||..|   :|..|..:.           
BL00860___pab    251 FRRIGSTEFPGKDGNLSKRLQEAYTNDRKAAKEYLS-----------    286


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