Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00981 and BL00124
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:31
# Commandline: needle
# -asequence pep-align/BSNT_00981___ydgK.1.5803.seq
# -bsequence pep-align/BL00124___ydgK.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00981___ydgK-BL00124___ydgK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00981___ydgK-BL00124___ydgK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00981___ydgK
# 2: BL00124___ydgK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 402
# Identity: 353/402 (87.8%)
# Similarity: 380/402 (94.5%)
# Gaps: 1/402 ( 0.2%)
# Score: 1780.0
#
#
#=======================================
BSNT_00981___ 1 MLHNPTGKERLALAFLLGMLAILGPLNIDMYLPSFPEIAEDLSASASLVQ 50
|||||.|||||||||||||||||||||||||||||||||:||.|.|||||
BL00124___ydg 1 MLHNPVGKERLALAFLLGMLAILGPLNIDMYLPSFPEIADDLGAGASLVQ 50
BSNT_00981___ 51 LSLTACLVGLTIGQLIVGPVSDAQGRRKPLLICIFLFALSSLFCALSPNI 100
|||||||:|||||||::||||||:||||||||.|.|||||||||||||||
BL00124___ydg 51 LSLTACLIGLTIGQLVIGPVSDAKGRRKPLLISISLFALSSLFCALSPNI 100
BSNT_00981___ 101 TTLVAARFLQGFTASAGLVLSRAIVRDVFTGRELSKFFSLLMVITAVAPM 150
.|||.||||||||||||:||||||||||||||||||||||||||||||||
BL00124___ydg 101 ATLVLARFLQGFTASAGIVLSRAIVRDVFTGRELSKFFSLLMVITAVAPM 150
BSNT_00981___ 151 VAPMTGGAILLLPFATWHTIFHVLMIIGFLLVLLIALRLKETLPPEKRIP 200
|||||||||||||||||||||:.|.:||.||||:|:::|.||||||||||
BL00124___ydg 151 VAPMTGGAILLLPFATWHTIFYTLALIGLLLVLVISMKLTETLPPEKRIP 200
BSNT_00981___ 201 SSIGTSVKTMGSLLKDRSFMGYALTVGFIHGGSFAYVSGTPFVYQDIYGV 250
||||:|:||||||||||||:||||||||||||||||||||||||||||||
BL00124___ydg 201 SSIGSSLKTMGSLLKDRSFIGYALTVGFIHGGSFAYVSGTPFVYQDIYGV 250
BSNT_00981___ 251 SPQVFSILFGINGLAIISGSFIIGRFGGIIHEKSLLRIAVITAMIATAVL 300
||||||:|||||||||||||||||||||||||:.|||||||||:|||:||
BL00124___ydg 251 SPQVFSVLFGINGLAIISGSFIIGRFGGIIHERKLLRIAVITAVIATSVL 300
BSNT_00981___ 301 LTMTMIHGPLATLVISIFIYMITIGMVLTSTFTLAMEKQGHRAGSASALL 350
||||::.||||.:|||||||||||||.||||||||||.||||||||||:|
BL00124___ydg 301 LTMTILKGPLAAIVISIFIYMITIGMTLTSTFTLAMENQGHRAGSASAML 350
BSNT_00981___ 351 GMLPLLLGSIVSPLVGINETTAVPMGAIMFVTAVIGSLAFFGLTKERVGQ 400
||||||||||||||||:|||||||||||||:||||||.|||.||:|..|:
BL00124___ydg 351 GMLPLLLGSIVSPLVGMNETTAVPMGAIMFITAVIGSFAFFALTRENQGE 400
BSNT_00981___ 401 NS 402
.
BL00124___ydg 401 R- 401
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