Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00002 and BL00077
See
DNA alignment /
Visit
BSNT_00002 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:39
# Commandline: needle
# -asequence pep-align/BSNT_00002___dnaN.1.5803.seq
# -bsequence pep-align/BL00077___dnaN.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00002___dnaN-BL00077___dnaN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00002___dnaN-BL00077___dnaN.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00002___dnaN
# 2: BL00077___dnaN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 378
# Identity: 342/378 (90.5%)
# Similarity: 355/378 (93.9%)
# Gaps: 0/378 ( 0.0%)
# Score: 1689.0
#
#
#=======================================
BSNT_00002___ 1 MKFTIQKDRLVESVQDVLKAVSSRTTIPILTGIKIVASDDGVSFTGSDSD 50
|||||||||||||||||||||||||||||||||||||||:|||.||||||
BL00077___dna 1 MKFTIQKDRLVESVQDVLKAVSSRTTIPILTGIKIVASDEGVSLTGSDSD 50
BSNT_00002___ 51 ISIESFIPKEEGDKEIVTIEQPGSIVLQARFFSEIVKKLPMATVEIEVQN 100
||||||||||:||.|||||||||||||||||||||||||||:||||||||
BL00077___dna 51 ISIESFIPKEDGDLEIVTIEQPGSIVLQARFFSEIVKKLPMSTVEIEVQN 100
BSNT_00002___ 101 QYLTIIRSGKAEFNLNGLDADEYPHLPQIEEHHAIQIPTDLLKNLIRQTV 150
||||||||||||||||||||.|||.|||||||||.|||||||||||||||
BL00077___dna 101 QYLTIIRSGKAEFNLNGLDASEYPLLPQIEEHHAFQIPTDLLKNLIRQTV 150
BSNT_00002___ 151 FAVSTSETRPILTGVNWKVEQSELLCTATDSHRLALRKAKLDIPEDRSYN 200
|||||||||||||||||.|...||:||||||||||||||||||.||.|||
BL00077___dna 151 FAVSTSETRPILTGVNWNVTGGELICTATDSHRLALRKAKLDINEDSSYN 200
BSNT_00002___ 201 VVIPGKSLTELSKILDDNQELVDIVITETQVLFKAKNVLFFSRLLDGNYP 250
|||||||||||||||||:||||||||||||||||.|||||||||||||||
BL00077___dna 201 VVIPGKSLTELSKILDDHQELVDIVITETQVLFKTKNVLFFSRLLDGNYP 250
BSNT_00002___ 251 DTTSLIPQDSKTEIIVNTKEFLQAIDRASLLAREGRNNVVKLSAKPAESI 300
||..||||:|||.:||||||||||||||||||||||||||||||...|||
BL00077___dna 251 DTNRLIPQESKTNLIVNTKEFLQAIDRASLLAREGRNNVVKLSAAANESI 300
BSNT_00002___ 301 EISSNSPEIGKVVEAIAADQIEGEELNISFSPKYMLDALKVLEGAEIRVS 350
||||||||||||||.:.|:|||||:|.|||||||||||||||||.:|.||
BL00077___dna 301 EISSNSPEIGKVVETVNAEQIEGEDLKISFSPKYMLDALKVLEGEDIHVS 350
BSNT_00002___ 351 FTGAMRPFLIRTPNDETIVQLILPVRTY 378
|||||||||||||||::|||||||||||
BL00077___dna 351 FTGAMRPFLIRTPNDDSIVQLILPVRTY 378
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.