Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04392 and BL00065
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:33
# Commandline: needle
# -asequence pep-align/BSNT_04392.1.5803.seq
# -bsequence pep-align/BL00065___ytdP.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04392-BL00065___ytdP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04392-BL00065___ytdP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04392
# 2: BL00065___ytdP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 769
# Identity: 229/769 (29.8%)
# Similarity: 303/769 (39.4%)
# Gaps: 372/769 (48.4%)
# Score: 1230.0
#
#
#=======================================
BSNT_04392 0 -------------------------------------------------- 0
BL00065___ytd 1 MKRKQYKFYYKLVTFFLILSTIPVIIVGFFSYQRSAETIEQNVTNEKLQT 50
BSNT_04392 0 -------------------------------------------------- 0
BL00065___ytd 51 VSQTQLNIEHILKTVDHSFTNYVRSYPLIQTLSRTITPERFQLYNQINKE 100
BSNT_04392 0 -------------------------------------------------- 0
BL00065___ytd 101 LNELQTFDTDLSDITLISQEKKWYINNSGLYPLDQGKQAITLSLYNALKS 150
BSNT_04392 0 -------------------------------------------------- 0
BL00065___ytd 151 RSSWVLEKNNDLVATKEGASGNCLYNVNLVKQLPLNSMENRGLAIASIPS 200
BSNT_04392 0 -------------------------------------------------- 0
BL00065___ytd 201 CSLVKRMPDHSKTNSMMVLDDNGRIILHSDPSMIGQSIKQENYFKTIRRH 250
BSNT_04392 0 -------------------------------------------------- 0
BL00065___ytd 251 QEKNGQFDTTVSDTAYNITYQKSDYNNWIYVSLTTIPELYQQTASIGWFT 300
BSNT_04392 0 -------------------------------------------------- 0
BL00065___ytd 301 FTICLILLALSYLFSWFGSRHFYRPIKVLYESVSGFSPGADSVQEKPKNE 350
BSNT_04392 1 ---------------------MKQQATHLQQYFMVRLMLGKLTDEEVDNR 29
::||.|.|:|||:.||:||||::||:.:|
BL00065___ytd 351 FELIERNIKEMKNKNHDLKVRVEQQVTQLKQYFLTRLLLGKLSEEEIKDR 400
BSNT_04392 30 FESLGLKQNWRHLALLVLQIDTLNHTPYEKKDMDLLLFAVNSLIERSIPT 79
|..||..::|.||::..||||||..|.|||||:|:||||:|||:|||:|.
BL00065___ytd 401 FTGLGFPEDWSHLSVFTLQIDTLKDTSYEKKDLDVLLFAINSLVERSVPK 450
BSNT_04392 80 DKHLAPAVVDKQQATILINQSGTKEEFMAELNETARMIQEKAEAELQLSV 129
:|.|.|.|:||.|..|::|:....|.|..:|..||..|::|...||.|.|
BL00065___ytd 451 NKRLPPVVIDKTQTIIMLNRGQPLERFQEDLEHTASAIKDKIHEELGLFV 500
BSNT_04392 130 SIGVSQPFDALTKAKTAYAEGSEALKYRLKAENKSIIFYEDLDQKKTFKT 179
|||:||||.:|..:|..|.||.|||.||||:...::||||.||:.|.|.|
BL00065___ytd 501 SIGISQPFTSLAMSKRGYLEGLEALTYRLKSGKHAVIFYEHLDRNKAFLT 550
BSNT_04392 180 HFPKQLQHELFDAVKAGDKEKADKCLHAILQAIFTQNTNPYQFQIAIARF 229
.||||:|:|||:|:|..::::|.:.||.:|::|.::|.||:..||||||.
BL00065___ytd 551 QFPKQIQNELFEAIKTCNRKQAAEQLHLLLESICSENMNPHHCQIAIARL 600
BSNT_04392 230 LNHVIELMHVLGIELFELEENKMLYDQIFELKTFEDTENWLKNEFIDPMT 279
||::||.||:||||:||..||.||||.:|||.|.|:.|:||..:.|..|.
BL00065___ytd 601 LNNLIEFMHLLGIEIFEPNENTMLYDDVFELTTIEEIESWLNAQIIVKMI 650
BSNT_04392 280 DKVNARADAQYKNISDNIIHIIHHEFESELTLDEIARRLHYNPNYLSSIF 329
|.::.|.::||||||:.|:|||..||:::|||:.||.|||||||||||||
BL00065___ytd 651 DTLSIREESQYKNISEKIVHIIQQEFDTDLTLESIAGRLHYNPNYLSSIF 700
BSNT_04392 330 KKEMGISFSEYVSSYRHHMAKSWLAETDMAVKDIAEKLKYKNSQNFIRSF 379
:|||.||||||:||||||:||:||.||.|:||:|:|||||||.|||||||
BL00065___ytd 701 RKEMKISFSEYLSSYRHHIAKNWLTETTMSVKEISEKLKYKNPQNFIRSF 750
BSNT_04392 380 KKLEGITPGNYRQQKRSM- 397
|||||||||.||:.|...
BL00065___ytd 751 KKLEGITPGKYRELKNHSA 769
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