Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06246 and RBAM_037790
See
Amino acid alignment /
Visit
BSNT_06246 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:41
# Commandline: needle
# -asequence dna-align/BSNT_06246___yybA.1.9828.seq
# -bsequence dna-align/RBAM_037790___yybA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06246___yybA-RBAM_037790___yybA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06246___yybA-RBAM_037790___yybA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06246___yybA
# 2: RBAM_037790___yybA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 454
# Identity: 377/454 (83.0%)
# Similarity: 377/454 (83.0%)
# Gaps: 2/454 ( 0.4%)
# Score: 1565.0
#
#
#=======================================
BSNT_06246___ 1 ATGAATGATATTTTGCGTGAGATCGGCATGATAGCAAGAGCGTTGGATTC 50
||||.||||||||||||.||.|||||||||||.|||.|.||..|||||||
RBAM_037790__ 1 ATGACTGATATTTTGCGGGAAATCGGCATGATCGCACGGGCACTGGATTC 50
BSNT_06246___ 51 CATAAGCAACATCGAATTTAAAGATTTGGACTTAACAAGAGGGCAGTATC 100
|||.|||||.||.|||||||||||.||.|||.||||||.|||||||||||
RBAM_037790__ 51 CATCAGCAATATTGAATTTAAAGAATTAGACCTAACAAAAGGGCAGTATC 100
BSNT_06246___ 101 TCTATCTCGTACGTATATACGAAAATCCGGGAATTATTCAAGAAAAATTG 150
||||.||.||.|||||||..|||||.||||||.|.||.||.||||||.||
RBAM_037790__ 101 TCTACCTTGTGCGTATATGTGAAAACCCGGGAGTGATACAGGAAAAAGTG 150
BSNT_06246___ 151 GCGGAAATGATAAAAGTGGACCGGACAACGGCCGCGCGGGCCATTAAGAA 200
|||||||||||.|||||.|||||.|||||.||.|||.||||.||.||.||
RBAM_037790__ 151 GCGGAAATGATTAAAGTCGACCGAACAACAGCGGCGAGGGCAATCAAAAA 200
BSNT_06246___ 201 GCTGGAAATGCAGGGATTTATTCAAAAATTGCCGGATGAGCAAAATAAAA 250
.||||||||.|||||.||||||.||||....||.|||||.||||||||||
RBAM_037790__ 201 ACTGGAAATACAGGGGTTTATTGAAAAGCGTCCTGATGATCAAAATAAAA 250
BSNT_06246___ 251 AAATAAAAAAACTGTTCCCGACTGAGAAAGGGAAAAAGGTATATCCATTG 300
||||||||||||||||.||||||||.|||||||.||||||.|||||.||.
RBAM_037790__ 251 AAATAAAAAAACTGTTTCCGACTGAAAAAGGGAGAAAGGTTTATCCGTTA 300
BSNT_06246___ 301 TTAAGAAGAGAAGGAGAACATTCCACGGAAGTAGCCTTGTCCGGTTTTAC 350
||...||||||||||||.|||||..||||.||.|||.|||||||.|||||
RBAM_037790__ 301 TTGCAAAGAGAAGGAGAGCATTCTGCGGAGGTGGCCCTGTCCGGCTTTAC 350
BSNT_06246___ 351 TTCAGAGGAAAAGGAAACCA-TTTCTGCACTCCTTCATAGAGTGAGGAAG 399
.||.||||||||.||||||| ||||.|| ||.|||||..|.|||||.||.
RBAM_037790__ 351 ATCTGAGGAAAAAGAAACCATTTTCAGC-CTTCTTCAGCGGGTGAGAAAA 399
BSNT_06246___ 400 AATATAGAACGTGATTGGGAATATGTGAAGAAGGGGAACAAAAGGGATTA 449
||||||||||.|||||||||||.|||||||||||||||.|||||.|||||
RBAM_037790__ 400 AATATAGAACATGATTGGGAATTTGTGAAGAAGGGGAATAAAAGAGATTA 449
BSNT_06246___ 450 TTAA 453
||||
RBAM_037790__ 450 TTAA 453
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.