Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01075 and RBAM_036570

See Amino acid alignment / Visit BSNT_01075 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:45
# Commandline: needle
#    -asequence dna-align/BSNT_01075.1.9828.seq
#    -bsequence dna-align/RBAM_036570.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01075-RBAM_036570.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01075-RBAM_036570.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01075
# 2: RBAM_036570
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 333
# Identity:     316/333 (94.9%)
# Similarity:   316/333 (94.9%)
# Gaps:           0/333 ( 0.0%)
# Score: 1512.0
# 
#
#=======================================

BSNT_01075         1 ATGGGGACAAGAGTGAGTTATCCGGTTGAAGTGAAACAGAAGGCTGTAGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_036570        1 ATGGGGACAAGAGTGAGTTATCCGGTTGAAGTGAAACAGAAGGCTGTAGA     50

BSNT_01075        51 AATGAGATTGGCAGGCGTACCTATGAAAGAGATCATGCAGGAGTTGAATA    100
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
RBAM_036570       51 AATGAGATTGGCAGGCGTACCTATGAAAGAGATCCTGCAGGAGTTGAATA    100

BSNT_01075       101 TCAAAAATAATACGCAGATTAAGACATGGGTCAGATGGTATAAGGCTGGT    150
                     |.||.|||||.||.|||.||.||||||||||.||||||||||||||||||
RBAM_036570      101 TTAAGAATAAGACACAGGTTCAGACATGGGTTAGATGGTATAAGGCTGGT    150

BSNT_01075       151 GATACACATCGATTTGAACAGCCTGTTGGTAAGCAATACACTTATGGAAA    200
                     ||||||||||||||.||||||||||||||.||||||||||||||.|||||
RBAM_036570      151 GATACACATCGATTCGAACAGCCTGTTGGAAAGCAATACACTTACGGAAA    200

BSNT_01075       201 AGGTCCGGAGTATTCTTCCGAATTAGAGAAACTGCAGGCAGAGAATCGAT    250
                     |||||||||||||||||||||.||||||||||||||||||||||.|||.|
RBAM_036570      201 AGGTCCGGAGTATTCTTCCGATTTAGAGAAACTGCAGGCAGAGATTCGTT    250

BSNT_01075       251 ATCTGAGACAACAGAATGAAGTGTTAAAAAAGTACAACGAATTGGAAAGG    300
                     |.||||||||||||||||||||.|||||||||||||||||||||||||||
RBAM_036570      251 ACCTGAGACAACAGAATGAAGTTTTAAAAAAGTACAACGAATTGGAAAGG    300

BSNT_01075       301 AAGTTGATAGCCAAACGTCAGTCGAACTTGTAG    333
                     |||||||||||.|||||||||||||||||||||
RBAM_036570      301 AAGTTGATAGCGAAACGTCAGTCGAACTTGTAG    333


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