Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05770 and RBAM_034890
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:16
# Commandline: needle
# -asequence dna-align/BSNT_05770___ywfF.1.9828.seq
# -bsequence dna-align/RBAM_034890___bacE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05770___ywfF-RBAM_034890___bacE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05770___ywfF-RBAM_034890___bacE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05770___ywfF
# 2: RBAM_034890___bacE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1190
# Identity: 975/1190 (81.9%)
# Similarity: 975/1190 (81.9%)
# Gaps: 13/1190 ( 1.1%)
# Score: 4014.0
#
#
#=======================================
BSNT_05770___ 1 ATGAAACAGCTGAAACCCAACTCTAAATACTTGCTTTACGGGCAGGCGCT 50
|||||||||||||||||.||||||||.||.|||||||.||||||||||||
RBAM_034890__ 1 ATGAAACAGCTGAAACCGAACTCTAAGTATTTGCTTTTCGGGCAGGCGCT 50
BSNT_05770___ 51 ATCGTTCATGGGAGACTATTGTGTTCTCCCTGCCCTGCTCATTTTGTCTA 100
.|||||.||||||||||||||.||||||||.||.||||||||||||||||
RBAM_034890__ 51 TTCGTTTATGGGAGACTATTGCGTTCTCCCGGCTCTGCTCATTTTGTCTA 100
BSNT_05770___ 101 CATATTATCACGATTATTGGGTGACGTCCGGGGTCATCGTGGTCAGAAGC 150
||||.||||||||.||.||||||||||||||.|||||||.||||.|.||.
RBAM_034890__ 101 CATACTATCACGACTACTGGGTGACGTCCGGCGTCATCGCGGTCCGCAGT 150
BSNT_05770___ 151 ATTCCGATGGTGTTTCAGCCGTTTTTGGGGGTTCTGGTCGACCGGTTAGA 200
||||||||||||||||||||||||||.||.||.||.||.||||||.|.||
RBAM_034890__ 151 ATTCCGATGGTGTTTCAGCCGTTTTTAGGCGTGCTCGTGGACCGGCTCGA 200
BSNT_05770___ 201 CAGAATTAAGATCATGCTGTGGACGGATATCATCAGAGGCATCATCTTTT 250
|||..|.||.||||||||||||||||||.|.||||||||..|||||||||
RBAM_034890__ 201 CAGGGTGAAAATCATGCTGTGGACGGATGTGATCAGAGGTGTCATCTTTT 250
BSNT_05770___ 251 TGGGGCTCACATTTCTTCCAAAAGGCGAGTATCCGCTGATCTTTCTGGCC 300
|||||||.||||||||.||.||||||||.||||||.||.|.||||||||.
RBAM_034890__ 251 TGGGGCTGACATTTCTCCCGAAAGGCGAATATCCGTTGCTTTTTCTGGCG 300
BSNT_05770___ 301 CTGCTGTTTATTTCTTATGGAAGCGGCGTGTTTTTTAATCCCGCCCGTCT 350
|||||||||.|||||||.||||||||||||||||||||.||.||.|||||
RBAM_034890__ 301 CTGCTGTTTGTTTCTTACGGAAGCGGCGTGTTTTTTAACCCGGCACGTCT 350
BSNT_05770___ 351 CGCTGTCATGTCGTCCTTGGAATCAGATATTAAAAGCATCAACACGTTAT 400
|||.|||||||||||.||.|||.|.||||||||||..||||||||.||.|
RBAM_034890__ 351 CGCGGTCATGTCGTCTTTAGAAGCGGATATTAAAAATATCAACACTTTGT 400
BSNT_05770___ 401 TTGCAAAAGCGACAACCATCTCCATTATCGTCGGGGCGGCTGCCGGAGGG 450
||||||||||.||.||.||.||.|||||.|||||.||.||.|||||.||.
RBAM_034890__ 401 TTGCAAAAGCCACGACGATTTCGATTATTGTCGGCGCTGCAGCCGGCGGA 450
BSNT_05770___ 451 CTCTTTCTGTTAGGCGGATCTGTAGAGCTGGCTGTTGCCTTTAACGGTGT 500
||.||||||||||||||.|||||.|||||.||.||.|||||||||||.||
RBAM_034890__ 451 CTTTTTCTGTTAGGCGGTTCTGTGGAGCTTGCCGTCGCCTTTAACGGGGT 500
BSNT_05770___ 501 GACATA-CTTGGTTTCGGCATTTTTTATCAGCCGCATCAAGCTGCAATTT 549
|||.|| ||| ||.||.||.|||||.|||||||||||.|||||.||||..
RBAM_034890__ 501 GACCTATCTT-GTCTCCGCGTTTTTCATCAGCCGCATTAAGCTTCAATAC 549
BSNT_05770___ 550 GTGCCGATTCAATCTGAAAACATAAAAGAGGCCTTCCAGTCTTTTAAAGA 599
|||||||||||.||.||||||.|.|.|||.||.||.|||||.||||||||
RBAM_034890__ 550 GTGCCGATTCAGTCAGAAAACGTGAGAGAAGCTTTTCAGTCGTTTAAAGA 599
BSNT_05770___ 600 AGGACTCAAAGAAATCAAAACCAATGCATTCGTATTAAACGCCATGTTTA 649
|||.||.||.|||||||||||.|||||.||.||.||||||||||||||.|
RBAM_034890__ 600 AGGCCTGAAGGAAATCAAAACAAATGCTTTTGTGTTAAACGCCATGTTCA 649
BSNT_05770___ 650 CGATGATTACGATG--GCTTTGCTGTGGGGAGTTGTGTACAGCTATTTTC 697
|||||||||||||| ||||| |||||||.||.||.|||||||||||.|
RBAM_034890__ 650 CGATGATTACGATGGCGCTTT--TGTGGGGTGTCGTCTACAGCTATTTCC 697
BSNT_05770___ 698 CGATTGTCAGCCGCTTTCTGGGTGACGGGGAAATCGGCAACTTTATCCTC 747
|||||||||||||||||.|.||.||||||||||||||.||.||.|||||.
RBAM_034890__ 698 CGATTGTCAGCCGCTTTTTAGGCGACGGGGAAATCGGAAATTTCATCCTG 747
BSNT_05770___ 748 ACATTCTGCATCGGCTTCGGCGGGTTCATCGGAGCGGCGCTTGTCAGTAA 797
||.|||||.||||||||||||||.||.|||||.||.|..||||||||.||
RBAM_034890__ 748 ACGTTCTGTATCGGCTTCGGCGGCTTTATCGGCGCCGGTCTTGTCAGCAA 797
BSNT_05770___ 798 ATGGGGCTTTAACAACAATAGAGGCCTGACGTACTTTACCGTTTTATCCA 847
||||||||||||||||||||.|||.||||.|||.|||||.||.|||||.|
RBAM_034890__ 798 ATGGGGCTTTAACAACAATAAAGGGCTGATGTATTTTACAGTGTTATCGA 847
BSNT_05770___ 848 TTGTCTCGCTGGCGCTGTTTTTATTTACGCCGATTTTCGCTGTTTCTGTC 897
|.||||||||.|||||||||||.|||||.|||||||||||.||.||.|||
RBAM_034890__ 848 TCGTCTCGCTTGCGCTGTTTTTGTTTACCCCGATTTTCGCCGTGTCAGTC 897
BSNT_05770___ 898 ATCGCGGCGATCCTCTTTTTCATCGCGATGGAATACGGGGAAGTGCTTGC 947
||.||.||.||.||.||.||.|||||.|||||||||||.||.|||||.||
RBAM_034890__ 898 ATTGCCGCCATTCTTTTCTTTATCGCAATGGAATACGGTGAGGTGCTGGC 947
BSNT_05770___ 948 AAAAGTGAAGGTTCAGGAAAATGCGGCAAACCAGATTCAAGGGCGCATTT 997
.||.||.||.||||||||.||.|||||.|||||||||||.||.||.||.|
RBAM_034890__ 948 GAAGGTCAAAGTTCAGGAGAACGCGGCGAACCAGATTCAGGGCCGGATCT 997
BSNT_05770___ 998 TTTCAGTGGCCGAAGCGTCTATCGGATTATGCATTTCTATTGGTTCAATG 1047
||||.|||||.||.|||||.||||||||.|||||..|..|.|||||.|||
RBAM_034890__ 998 TTTCGGTGGCGGAGGCGTCCATCGGATTGTGCATCGCCGTCGGTTCCATG 1047
BSNT_05770___ 1048 TTCATTAACATCCTAAGCGCTCCGGTCATTATGGGGCTGATTGTCGTGAT 1097
.|.||.|||||..||..|||..|.|||||.||||.|.|.||.|||.|..|
RBAM_034890__ 1048 CTGATCAACATTGTAGACGCGGCAGTCATCATGGCGTTTATCGTCCTTTT 1097
BSNT_05770___ 1098 CGTATGCGGTTTGTTTCTGCATACGAAGCTCGTCAACAAATCGTTTTTGG 1147
.||..||||..|||||||||||||.||.||.|||||.|||||.||||..|
RBAM_034890__ 1098 GGTCAGCGGGCTGTTTCTGCATACAAAACTGGTCAATAAATCCTTTTCAG 1147
BSNT_05770___ 1148 AACGGGATAACAAAACGGAGCAAAAAGGAGTCTTTTAG-- 1185
|||||.|||||.||.|.|||||| |.||.||||.
RBAM_034890__ 1148 AACGGAATAACGAATCAGAGCAA-----ATTCATTTATAA 1182
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