Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05182 and RBAM_031590
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:40
# Commandline: needle
# -asequence dna-align/BSNT_05182___yveS.1.9828.seq
# -bsequence dna-align/RBAM_031590___epsI.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05182___yveS-RBAM_031590___epsI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05182___yveS-RBAM_031590___epsI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05182___yveS
# 2: RBAM_031590___epsI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1114
# Identity: 826/1114 (74.1%)
# Similarity: 826/1114 (74.1%)
# Gaps: 74/1114 ( 6.6%)
# Score: 2961.5
#
#
#=======================================
BSNT_05182___ 1 ATGTCGTTACAATCGTTGAAAATCAATTTTGCAGAATGGCTGCTGCTAAA 50
||||||.|||||||.||.|||||||||.|.||.|||||||||.||||.||
RBAM_031590__ 1 ATGTCGATACAATCTTTAAAAATCAATCTCGCGGAATGGCTGTTGCTTAA 50
BSNT_05182___ 51 GGTCAAATACCCGTCCCAAT---ATTGGCTGGGAGCGGCAGATCAGCCGG 97
|||||||||||||||||||| ||| |.|||.|||||| |||
RBAM_031590__ 51 GGTCAAATACCCGTCCCAATTTCATT---TCGGAACGGCAG------CGG 91
BSNT_05182___ 98 TAAAGGCCGCAGC--ACATC----AGAAAAAA-ATCATACTGACCCTGCT 140
|..||.||.||| |||.| |||||||| |||||.|||||.|||||
RBAM_031590__ 92 -ATGGGGCGGAGCTTACAGCGGCAAGAAAAAAGATCATTCTGACGCTGCT 140
BSNT_05182___ 141 GCCGTCCCATGACAATTTGGGAGATCACGCAATTGCTTATGCCAGCAAGG 190
.||||||||.||.|||.|.||.||||||||.||.||.||.||.|||||..
RBAM_031590__ 141 CCCGTCCCACGATAATCTCGGCGATCACGCCATCGCCTACGCAAGCAAAA 190
BSNT_05182___ 191 CATTTCTTGAGCAAGAATACCCGGACTTTGACATCGTCGAGGTTGATATG 240
|.||||||||.|..||.||.||.||.||||||||.||||||||.||||||
RBAM_031590__ 191 CGTTTCTTGAACGGGAGTATCCCGATTTTGACATTGTCGAGGTGGATATG 240
BSNT_05182___ 241 AAGGACATTTACAAATCAGCAAAAAGC-CTGATCCGCTCGCGCCATCCGG 289
|||||.||.||||.|||.|| |||||| ||||||.....||||||.||.|
RBAM_031590__ 241 AAGGATATATACAGATCCGC-AAAAGCACTGATCAAAAAGCGCCACCCCG 289
BSNT_05182___ 290 AGGATATGGTCTTTATCATCGGCGGCGGAAACATGGGGGATATATACCGT 339
|.||||||||.||.||||||||||||||.||||||||||||.|.|||||.
RBAM_031590__ 290 ATGATATGGTATTCATCATCGGCGGCGGGAACATGGGGGATTTGTACCGG 339
BSNT_05182___ 340 TATGAGGAGTGGACGCGCCGCTTCATCATTAAAACATTCCATGACTATCG 389
||||||||.|||||.||||||||..||||.||||||||||...|.|||||
RBAM_031590__ 340 TATGAGGAATGGACACGCCGCTTTGTCATAAAAACATTCCGGCAATATCG 389
BSNT_05182___ 390 GGTTGTCCAGCTTCCGGCAACGGCTCATTTTTCTGACACGAAAAAAGGG- 438
|.|.||.|||||||||||.||||||||.|||||||| |..|||||||||
RBAM_031590__ 390 GATCGTTCAGCTTCCGGCGACGGCTCACTTTTCTGA-ATCAAAAAAGGGA 438
BSNT_05182___ 439 CGCAAAGAGCTGAAACGGGCACAGAAAA-TTTATAATGCGCACCCCGGCC 487
||.||.||.|||||.||.|| |.||||| |.||.||||||||.||||.||
RBAM_031590__ 439 CGGAAGGAACTGAAGCGCGC-CCGAAAAGTGTACAATGCGCATCCCGACC 487
BSNT_05182___ 488 TGTTGCTGATGGCGCGGGATGAAACAACGTATCAATTTATGAAACAGCAT 537
|.|||.|.||||||.|.|||||.||.||||||||||..|||||.|..|||
RBAM_031590__ 488 TTTTGTTAATGGCGAGAGATGAGACGACGTATCAATGGATGAAGCGCCAT 537
BSNT_05182___ 538 TTTCAAGAAAAAACAATTTTGAAGCAGCCGGACATGGTGCTGTATTTAGA 587
||||..|.|||||||.|..|.||.|||||.||||||||..|.|||||.||
RBAM_031590__ 538 TTTCCCGGAAAAACAGTGCTCAAACAGCCTGACATGGTCTTATATTTGGA 587
BSNT_05182___ 588 TAGAAGCAAGACCCCCGCAGAACGC--GAAGGGGTTTATATGTGTTTGCG 635
||.|||| ||.|...|||.|.||| ||||||.|.||..|.|||||.||
RBAM_031590__ 588 TAAAAGC--GAGCGGGGCATACCGCGGGAAGGGATCTACCTCTGTTTACG 635
BSNT_05182___ 636 CGAGGATCAGGAAAGCGTGCTTCAGGAGGAGCAGAGGA---ACCGA--GT 680
.||||||.||||.||.|.||| ||.| ||.||||| |.||| ||
RBAM_031590__ 636 GGAGGATAAGGAGAGTGCGCT----GACG-GCTGAGGACAGAACGATGGT 680
BSNT_05182___ 681 CAAAGCTGCGTTATTTG----AGGAATTCAGCGAGATCAAACCCTTTACG 726
.||||..|| |||| |.||.|.|.|.|||.|..|..||||||||
RBAM_031590__ 681 AAAAGAAGC----TTTGGCAAAAGAGTACGGAGAGCTGTATTCCTTTACG 726
BSNT_05182___ 727 ACAACGATCGGGCGCCGGGTCAGCCGCGATACACGCGAACAAGAACTTGA 776
||.|||.||||.||..|||||||||||.||||.||.|||.|.||.||.||
RBAM_031590__ 727 ACGACGGTCGGCCGGAGGGTCAGCCGCCATACGCGTGAAAAGGAGCTGGA 776
BSNT_05182___ 777 AGCGCTGTGGTCTAAGCTGCAAAGCGCAGAAGCCGTCGTCACTGACAGGC 826
.|||||.|||..||.||||.||.||||.||||||||||||||||||||||
RBAM_031590__ 777 GGCGCTTTGGAATACGCTGAAAGGCGCGGAAGCCGTCGTCACTGACAGGC 826
BSNT_05182___ 827 TTCATGGCATGATTTTTTGCGCGCTGACAGGAACGCCGTGTGTTGTCATT 876
||||.||.|||||||||||.||||||||...||||||.|||||.||||||
RBAM_031590__ 827 TTCACGGGATGATTTTTTGTGCGCTGACGAAAACGCCTTGTGTCGTCATT 876
BSNT_05182___ 877 CGCTCCTTTGACCATAAGGTGATGGAGGGCTATCAATGGCTTAAAGACAT 926
||.||.|||||.||||||||||||||.||||||||||||||.|||.||||
RBAM_031590__ 877 CGTTCGTTTGATCATAAGGTGATGGAAGGCTATCAATGGCTGAAAAACAT 926
BSNT_05182___ 927 CCCGTTCATGAAGCTGATAGAACATCCGGAGCCAG-AGCGCGTAACAGCC 975
.|||..|||||...||.|.||||.|||.||.||.| ||| .|||||.|||
RBAM_031590__ 927 ACCGAACATGACATTGCTTGAACGTCCAGACCCTGAAGC-TGTAACGGCC 975
BSNT_05182___ 976 GCAGTCAATGAGCTTTTAA----CAA-----AAGAAACACCCCGTGCAGG 1016
||.||.||...|||..|.| ||| |.||| |..||
RBAM_031590__ 976 GCCGTAAACCGGCTGCTCAGCGGCAAGCATGAGGAA---------GGCGG 1016
BSNT_05182___ 1017 --CTTTCCG-AGAGATGTGTATTTTAAAGGTCTGCGTGACAAAATCAGCG 1063
||||.|| || |||.||||||...||.|||||....||||||||||
RBAM_031590__ 1017 TTCTTTGCGCAG---TGTTTATTTTGCCGGGCTGCGCTCGAAAATCAGCG 1063
BSNT_05182___ 1064 GTGAAGCGCAATGA 1077
||||.||.||||||
RBAM_031590__ 1064 GTGATGCCCAATGA 1077
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