Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04983 and RBAM_030580
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:31
# Commandline: needle
# -asequence dna-align/BSNT_04983___yvgO.1.9828.seq
# -bsequence dna-align/RBAM_030580___yvgO.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04983___yvgO-RBAM_030580___yvgO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04983___yvgO-RBAM_030580___yvgO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04983___yvgO
# 2: RBAM_030580___yvgO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 494
# Identity: 379/494 (76.7%)
# Similarity: 379/494 (76.7%)
# Gaps: 16/494 ( 3.2%)
# Score: 1434.0
#
#
#=======================================
BSNT_04983___ 1 TTGAAACGTATTCGTATCCCAATGACACTTGCTCTTGGTGCCGCTTTGAC 50
.||||||||||.||||||||.|||.|..||||.|||||.|||||||||.|
RBAM_030580__ 1 ATGAAACGTATGCGTATCCCGATGTCCGTTGCCCTTGGCGCCGCTTTGTC 50
BSNT_04983___ 51 AATTGCCCCTTTGTCCTTTGCTTCCGCTGAAGAAAATCCTG---CTCCGA 97
..|..|.|||.|||||||||..|||||..||||||..||.| |||..|
RBAM_030580__ 51 TCTGACTCCTCTGTCCTTTGTATCCGCAAAAGAAACCCCGGTCCCTCAAA 100
BSNT_04983___ 98 AGATGTCGCAGACAA----CTGCTGCTGGAACAACTGCCGCTGATGTAGG 143
|.|||.|.||| ||| |.|.|||...|.||| ..|||||.||
RBAM_030580__ 101 ACATGGCACAG-CAATCATCAGATGCCTCAGCAA------AAGATGTCGG 143
BSNT_04983___ 144 TTTAAACGTCAATCTGGATGTACTTGGAATTGCCAACCAGATCGCTGATG 193
.||||||.|..|..|.||..|.||.||.||.|.|||...|||.|||||.|
RBAM_030580__ 144 ATTAAACATTGACGTTGACCTGCTCGGCATCGGCAATTCGATTGCTGACG 193
BSNT_04983___ 194 CCATCAAATCCGCACAGAACAGGGATGGGTTTGTGAAAAACCTCATGGAG 243
|.||.||.||.||.||.|||.|.||.||.||.||.||||||.|.|||||.
RBAM_030580__ 194 CGATTAAGTCGGCGCAAAACCGTGACGGCTTCGTCAAAAACTTAATGGAA 243
BSNT_04983___ 244 TCTTCCTTCTACGCATCCGGCCAAAAATATAATGTCATGGTCTTTAATTT 293
|||||.||||||||.|||||.|||||||||||.||||||||.||||||||
RBAM_030580__ 244 TCTTCATTCTACGCTTCCGGACAAAAATATAACGTCATGGTGTTTAATTT 293
BSNT_04983___ 294 AAGCCAGGAATATGAAGATCATTTGAACGGTGTGCAATTTTACGGCTCAG 343
||||||||||||||||||||||||.|||||.||.||.||||||||.||.|
RBAM_030580__ 294 AAGCCAGGAATATGAAGATCATTTTAACGGCGTTCAGTTTTACGGTTCCG 343
BSNT_04983___ 344 CCGTTTACGACGGCATTACGTATGGCATTTGGGTATTTGAAGATGGAACC 393
|||||||.||||||||.|||||.|||||||||||.||||||||.||||.|
RBAM_030580__ 344 CCGTTTATGACGGCATCACGTACGGCATTTGGGTGTTTGAAGACGGAAGC 393
BSNT_04983___ 394 TTTACAAACAAAGGCGATGGCGGCTGGATCAACTGGGCCTTCAGAGGCTG 443
||.||.||.|||||.|||||||||||||||||||||||||||||||||||
RBAM_030580__ 394 TTCACCAATAAAGGTGATGGCGGCTGGATCAACTGGGCCTTCAGAGGCTG 443
BSNT_04983___ 444 GTTCGACCGGGATGGC-AGCACTGTCGCATTTCATCGCCCTTAA 486
|||.|||||.||.||| |.||| ||||.|||.|||||.||.|||
RBAM_030580__ 444 GTTTGACCGCGACGGCGATCAC-GTCGAATTCCATCGTCCGTAA 486
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