Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04327 and RBAM_026830
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:47
# Commandline: needle
# -asequence dna-align/BSNT_04327___acuC.1.9828.seq
# -bsequence dna-align/RBAM_026830___acuC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04327___acuC-RBAM_026830___acuC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04327___acuC-RBAM_026830___acuC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04327___acuC
# 2: RBAM_026830___acuC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1216
# Identity: 881/1216 (72.5%)
# Similarity: 881/1216 (72.5%)
# Gaps: 74/1216 ( 6.1%)
# Score: 3185.5
#
#
#=======================================
BSNT_04327___ 1 ATGGCCGTCAGAGCAAAGGGATCTGCTATGAGAGACAGTGTATTTATCTA 50
|||||||||||.||.|||.|.||
RBAM_026830__ 1 ---------------------------ATGAGAGACAGCGTTTTTGTTTA 23
BSNT_04327___ 51 TTCTCCATCCTACCAAACCTATATGTTTCATCAGGAGCATCCCTTTAATC 100
.||.||.||.||.||.||.|||...|||||||||||.|||||.||.||||
RBAM_026830__ 24 CTCGCCTTCTTATCAGACGTATCAATTTCATCAGGAACATCCGTTCAATC 73
BSNT_04327___ 101 AGCAGCGGGTTCTGTTAACATATGATTTGCTTAAGACGATCAATGCCTTT 150
|||..||.||.||.||||||||.|||.|||||.||.||....||||.|||
RBAM_026830__ 74 AGCGTCGTGTGCTTTTAACATACGATCTGCTTCAGGCGGCGGATGCGTTT 123
BSNT_04327___ 151 GATGATGGAGACATTGTCACCCCCAGACTCGCTTCAG---AAGAGGAGCT 197
||.||.|||||.||.|||||.|| .|.|||..|.| ||||.|||||
RBAM_026830__ 124 GACGAAGGAGATATCGTCACACC---GCGCGCGGCCGCTAAAGAAGAGCT 170
BSNT_04327___ 198 TTCCCTTGTCCACACGGACGATTACATTCAGGCCGTAAAGCTTGCGGGCG 247
..|.||.||.||.|||||.|||||.||.|||||.||..|.||.|||||.|
RBAM_026830__ 171 GGCTCTCGTTCATACGGAGGATTATATACAGGCGGTGGAACTAGCGGGTG 220
BSNT_04327___ 248 CCGGAAAGCTTCCCGCTGAAGAAGGAGAAAGCTACGGGCTCGGCACTGAA 297
|.||...|||.||.||.|.||||||||||||||||||.|||||.||.|||
RBAM_026830__ 221 CGGGCCGGCTCCCTGCCGCAGAAGGAGAAAGCTACGGTCTCGGAACGGAA 270
BSNT_04327___ 298 GACACACCCGTCTTTGCCGGCATGCACGAAGCGGCATCACTCTTGGTCGG 347
|||||.|||||.||||||||||||||.|||||.||.|||||..||||.||
RBAM_026830__ 271 GACACCCCCGTTTTTGCCGGCATGCATGAAGCCGCGTCACTTCTGGTGGG 320
BSNT_04327___ 348 CGGCACTTTAACGGCCGCAGACTGGGTCATGTCAGGACAAGCCCTGCATG 397
||||||.||||||||.||.||.|..||||||.|.||||||||...|||.|
RBAM_026830__ 321 CGGCACCTTAACGGCGGCTGATTATGTCATGACGGGACAAGCAAGGCACG 370
BSNT_04327___ 398 -CGGCAAACCTT--GGCGGAGGGCTTCATCACGGCTTTCGTGGGAGAGCT 444
|.|||| || ||.||.||.|||||.||||||||.||.||.||.||.
RBAM_026830__ 371 CCTGCAA---TTTAGGAGGCGGCCTTCACCACGGCTTCCGCGGCAGGGCC 417
BSNT_04327___ 445 TCAGGGTTTTGCATATATAATGACAGCGCTGTGGCGATTCAATATATCCA 494
|||||.|||||.||.||||||||||||||.|||||.||.|||||.|||||
RBAM_026830__ 418 TCAGGCTTTTGTATCTATAATGACAGCGCCGTGGCCATCCAATACATCCA 467
BSNT_04327___ 495 GAAAAAATACAGATCCAGGGTACTTTATATTGATACCGACGCCCACCACG 544
|||.||.|||.|..|.|..||.||.||.||||||||.||||||||.||||
RBAM_026830__ 468 GAAGAACTACGGGGCAAAAGTGCTATACATTGATACAGACGCCCATCACG 517
BSNT_04327___ 545 GGGACGGTGTGCAATTTACCTTTTACGATAATCCTGACGTATGCACGCTG 594
|.|||||.||.||||||||.||||||||.|...||||.||.|||||..|.
RBAM_026830__ 518 GCGACGGCGTTCAATTTACGTTTTACGACAGGTCTGATGTCTGCACTGTT 567
BSNT_04327___ 595 TCCATTCATGAAACAGGAAGGTATTTATTCCCTGGAACCGGTCAGATCCA 644
||..||||.||.||.||..|.||||||||.||.||.||.||.|||.|.|.
RBAM_026830__ 568 TCTTTTCACGAGACCGGGCGTTATTTATTTCCCGGGACGGGACAGGTACT 617
BSNT_04327___ 645 AGAAAAAGGCAGCGGAAAAGGATATGGCTATTCCTTTAATATCCCGCTTG 694
.||||||||.|||||..|.||.||.||||||||.|||||.||.|||||.|
RBAM_026830__ 618 GGAAAAAGGAAGCGGGCAGGGCTACGGCTATTCTTTTAACATTCCGCTGG 667
BSNT_04327___ 695 ACGCTTTTACAGAGGATGATTCTTTTCTTGAGGCTTACCGGACAGCAGCT 744
|||||||.||||||||.|||||.||||||.|.||||||...||.||.||.
RBAM_026830__ 668 ACGCTTTCACAGAGGACGATTCCTTTCTTCACGCTTACAATACGGCCGCC 717
BSNT_04327___ 745 TCAGAAGTCGCCGCTTATTTCAAGCCCGATGTCATTATCAGCCAAAACGG 794
||||||.||||.||||.|||||||||.|||||.|||.|.|.|||||||||
RBAM_026830__ 718 TCAGAAATCGCGGCTTTTTTCAAGCCGGATGTGATTCTTACCCAAAACGG 767
BSNT_04327___ 795 CGCCGATGCCCATTACTACGACCCGCTGACGCATTTATCAGCA--ACAAT 842
.||.||.||||||||.||||||||..||||.||..|.|| || |||||
RBAM_026830__ 768 TGCGGACGCCCATTATTACGACCCATTGACACACCTGTC--CAATACAAT 815
BSNT_04327___ 843 CAATATATACGAAGAAATCCCCCGTCTTGCACACACTTTGGCTCATCAAT 892
|...||.||..|.||.|||||.||.||.||.||..|.||.||.|||||||
RBAM_026830__ 816 CTCCATTTATCAGGAGATCCCGCGGCTCGCTCATTCATTAGCCCATCAAT 865
BSNT_04327___ 893 ATTGCGGAGGGAAATGGATTGCAGTCGGAGGCGGCGGATATGATATTTGG 942
|||||.|.||.|.||||||.||.|||||.|||||||||||.|||||||||
RBAM_026830__ 866 ATTGCAGCGGCAGATGGATCGCGGTCGGCGGCGGCGGATACGATATTTGG 915
BSNT_04327___ 943 CGCGTCGTGCCCCGCGCCTGG-GCCAGAATATGGCTTGAAATGAAGGGAA 991
.|.|||||.||..|.||.||| ||| |.||.||||||||.|||||.||.|
RBAM_026830__ 916 AGAGTCGTCCCGAGAGCGTGGAGCC-GCATTTGGCTTGAGATGAAAGGGA 964
BSNT_04327___ 992 TTGA-CCCGGGACACGAG---ATCCCGCCGGAATGGATTGCTAAATGGCA 1037
|||| |||||| ||| ||.||||.|.|||||||||.|||||||||
RBAM_026830__ 965 TTGATCCCGGG----GAGCGCATACCGCAGAAATGGATTGATAAATGGCA 1010
BSNT_04327___ 1038 AAAACAATGCCC-----CGTGGCCCTTCCGTCGAGC----TGGAGCGATC 1078
.||.||.|.||| |||.|||| || |||||.||||
RBAM_026830__ 1011 GAAGCATTCCCCCTGCACGTTGCCC---------GCTTTTTGGAGTGATC 1051
BSNT_04327___ 1079 CGGCTGATTTATATCCTCCGATTCCCCGCAAGCCTGAAATTACAGAAAAA 1128
|.|...|.|||||||||||||||||||||||....||||||.||||||||
RBAM_026830__ 1052 CTGAACAATTATATCCTCCGATTCCCCGCAAAGAAGAAATTTCAGAAAAA 1101
BSNT_04327___ 1129 AATGCCCAAACTGTCAGCAAAGCATTATATGCGATACGTTCTGAACAGC- 1177
|||||||||||.||....|||||..|.|.|||.||.||.|||||.||||
RBAM_026830__ 1102 AATGCCCAAACCGTGGAAAAAGCGCTTTTTGCCATCCGGTCTGAGCAGCG 1151
BSNT_04327___ 1178 --AAAGAACAAAGTAA 1191
|.|.|||.||.|||
RBAM_026830__ 1152 GTATAAAACTAAATAA 1167
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