Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04314 and RBAM_026560
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:46
# Commandline: needle
# -asequence dna-align/BSNT_04314___yttP.1.9828.seq
# -bsequence dna-align/RBAM_026560___yttP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04314___yttP-RBAM_026560___yttP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04314___yttP-RBAM_026560___yttP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04314___yttP
# 2: RBAM_026560___yttP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 643
# Identity: 504/643 (78.4%)
# Similarity: 504/643 (78.4%)
# Gaps: 38/643 ( 5.9%)
# Score: 2002.0
#
#
#=======================================
BSNT_04314___ 1 ATGAAAGTAAGCACCAAAGACAAAATTATTGAATCTGCTGTCATGCTTTT 50
||||||||||||||||||||||||||||||.|..|.||||||..|||.||
RBAM_026560__ 1 ATGAAAGTAAGCACCAAAGACAAAATTATTAACGCCGCTGTCCAGCTGTT 50
BSNT_04314___ 51 TAACCAAAAAGGATTTTCTGGCACGTCTGTCCGTGAAATCGCAAAGTCAG 100
||||||||||||.|.|||.||||||||.||||||||||||||||||||||
RBAM_026560__ 51 TAACCAAAAAGGTTATTCCGGCACGTCCGTCCGTGAAATCGCAAAGTCAG 100
BSNT_04314___ 101 CTGATGTAAATGTTGCGCACATCTCCTACTATTTTAAAGGCAAAGGAGGC 150
||||||||||||||||||||||||||||||||||||||||.|||||.||.
RBAM_026560__ 101 CTGATGTAAATGTTGCGCACATCTCCTACTATTTTAAAGGGAAAGGCGGA 150
BSNT_04314___ 151 TTGATGGAAAACTTAGTTTCAGAGTTTTACGAGGGCTACAGCAAAACGCT 200
||.||||||.|.||||||||.|||||||||||.|||||.|...||.||||
RBAM_026560__ 151 TTAATGGAACATTTAGTTTCCGAGTTTTACGAAGGCTATACTGAAGCGCT 200
BSNT_04314___ 201 TGAAACAGCGGCAAGCAATATCTCTTCTCAAAG-------CACGCAGGAA 243
.||||.|||.||...||.|| |.||.| |.||||||||
RBAM_026560__ 201 GGAAAAAGCCGCCGTCAGTA-------TGAACGGTGAAGACGCGCAGGAA 243
BSNT_04314___ 244 CAGC-TTCTTCAATTGGTTTTCGATATTTTATCCTATCAGCATAATCATC 292
| || |.||.|...||.|||||||||||||||||||||||||.|||.|.|
RBAM_026560__ 244 C-GCATCCTGCGGGTGATTTTCGATATTTTATCCTATCAGCACAATAACC 292
BSNT_04314___ 293 GTCAATTAACTCGTTTTGTCTACCGGGAAGTCACAATTGACTCCACATTA 342
||||||||||.||.|||||.|||||||||||.||.|||||.|||....|.
RBAM_026560__ 293 GTCAATTAACGCGGTTTGTGTACCGGGAAGTGACGATTGATTCCGTGCTT 342
BSNT_04314___ 343 ATCAGGGAAATTATGTCGACATATCTAATGAAGGAAAAGTATATCTTCCA 392
|||||||||||||||||.||.||..|||||||.|||||.|||||.|||||
RBAM_026560__ 343 ATCAGGGAAATTATGTCTACTTACTTAATGAAAGAAAAATATATTTTCCA 392
BSNT_04314___ 393 GCTGATCATTGAGGAAGG--AG-------AAAAACAGCGTGAATATTTAA 433
||||.|.|||||.||||| || |.|.||.|| |.|
RBAM_026560__ 393 GCTGGTGATTGAAGAAGGGCAGTCACGCCATAGACGGC---------TGA 433
BSNT_04314___ 434 CGCTGCCGCTGCCTCATTTTATTCTCCAATTAAAATCTCTCTTGATGATG 483
|||||||..||||.|||||||||||.|||||.|||||.||||||||||||
RBAM_026560__ 434 CGCTGCCCGTGCCGCATTTTATTCTGCAATTGAAATCCCTCTTGATGATG 483
BSNT_04314___ 484 CCCTATCTCCAGCCTCAATATATTTCAGAAGTACTCTACATGCAGCCGCA 533
||.|||||||||||||||||||||.|.||.||.|||||.||||||||.||
RBAM_026560__ 484 CCGTATCTCCAGCCTCAATATATTACGGAGGTGCTCTATATGCAGCCTCA 533
BSNT_04314___ 534 CGAGCCGTATTTTTATAAAATGTATTTTGAAGAAATCAAGATTTGGATCA 583
.||||.|||.||||||||||.||||||||||||..|.|||||.||||||.
RBAM_026560__ 534 TGAGCGGTACTTTTATAAAAGGTATTTTGAAGAGGTGAAGATCTGGATCG 583
BSNT_04314___ 584 GAAGCGTCTTCCGGACAGG--AGACGTGGCGCTCACCAACTAG 624
.||||||.|||| ||| || .||.|..|||||.|..||.||.
RBAM_026560__ 584 AAAGCGTGTTCC-GAC-GGCCTGATGCAGCGCTTATGAAGTAA 624
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