Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04253 and RBAM_026170
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:41
# Commandline: needle
# -asequence dna-align/BSNT_04253___icd.1.9828.seq
# -bsequence dna-align/RBAM_026170___icd.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04253___icd-RBAM_026170___icd.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04253___icd-RBAM_026170___icd.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04253___icd
# 2: RBAM_026170___icd
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1283
# Identity: 1082/1283 (84.3%)
# Similarity: 1082/1283 (84.3%)
# Gaps: 22/1283 ( 1.7%)
# Score: 4616.5
#
#
#=======================================
BSNT_04253___ 1 GTGGCACAAGGTGAAAAAATTACAGTCTCTAACGGAGTATTAAACGTACC 50
|||.||||||||||||||||||||||||||||.|||||||||||||||||
RBAM_026170__ 1 GTGTCACAAGGTGAAAAAATTACAGTCTCTAATGGAGTATTAAACGTACC 50
BSNT_04253___ 51 AAACAACCCGATTATCCCATTTATCGAAGGAGACGGAACTGGTCCTGATA 100
|||.||.|||||||||||.|||||.|||||.|||||.||.||.|||||||
RBAM_026170__ 51 AAATAATCCGATTATCCCGTTTATTGAAGGCGACGGCACAGGCCCTGATA 100
BSNT_04253___ 101 TTTGGAACGCGGCTTCGAAGGTTTTAGAAGCAGCAGTAGAAAAAGCATAC 150
||||||||||.|||||.||.||.||.|||||.||.||.|||||||||||.
RBAM_026170__ 101 TTTGGAACGCCGCTTCTAAAGTATTGGAAGCCGCTGTTGAAAAAGCATAT 150
BSNT_04253___ 151 AAAGGCGAAAAGAAAATTACATGGAAAGAAGTTTACGCCGGAGAAAAGGC 200
||||||||.||.|||||.||.||||||||||||||.|||||.||||||||
RBAM_026170__ 151 AAAGGCGAGAAAAAAATCACGTGGAAAGAAGTTTATGCCGGTGAAAAGGC 200
BSNT_04253___ 201 TTATAATAAAACAGGTGAGTGGCTCCCTGCTGAAACATTAGATGTGATCC 250
||||||||||||||||||||||||.|||||.|||||..|.||.|..|||.
RBAM_026170__ 201 TTATAATAAAACAGGTGAGTGGCTTCCTGCCGAAACGCTGGAAGACATCA 250
BSNT_04253___ 251 GCGAATATTTCATCGCGATTAAAGGCCCGTTAACGACACCTGTCGGCGGC 300
|.||.||.||||||||.||.|||||.||..|.||||||||.|||||||||
RBAM_026170__ 251 GAGAGTACTTCATCGCCATCAAAGGTCCTCTGACGACACCGGTCGGCGGC 300
BSNT_04253___ 301 GGTATCCGTTCTTTGAACGTAGCGCTCAGACAAGAGCTTGACCTATT--C 348
||||||||||||.|||||||.|||||.|||||.||||||||..|.|| |
RBAM_026170__ 301 GGTATCCGTTCTCTGAACGTGGCGCTGAGACAGGAGCTTGATTTGTTTAC 350
BSNT_04253___ 349 GT--CTGCTTAAGACCTGTAAGATACTTTACTGGAGTGCCGTCACCGGTA 396
|| |||| |.|||||.|||||.||.||.||||||||.||.|||||.
RBAM_026170__ 351 GTGCCTGC----GCCCTGTCAGATATTTCACGGGAGTGCCTTCTCCGGTC 396
BSNT_04253___ 397 AAACGCCCTGAAGATACTGATATGGTCATCTTCCGTGAAAATACAGAAGA 446
|||||.|||||||||||.|||||||||||.|||||.||.|||||.|||||
RBAM_026170__ 397 AAACGACCTGAAGATACGGATATGGTCATTTTCCGCGAGAATACGGAAGA 446
BSNT_04253___ 447 TATTTACGCAGGCATCGAGTATGCAAAAGGCTCTGAAGAAGTGCAAAAGC 496
|||||||||.||.||.||||||||.|||||.||||||||.||..||||||
RBAM_026170__ 447 TATTTACGCCGGAATTGAGTATGCGAAAGGTTCTGAAGAGGTTGAAAAGC 496
BSNT_04253___ 497 TTATCAGCTTCCTTCAAAATGA-----GTTAAACGTCAATAAAATCCGTT 541
|.|||||||||||.|||||||| || ||.||.||||||||||
RBAM_026170__ 497 TGATCAGCTTCCTGCAAAATGAAATGGGT-----GTTAACAAAATCCGTT 541
BSNT_04253___ 542 TCCCTGAGACATCAGGTATCGGCATTAAGCCTGTTTCAGAAGAAGGAACA 591
|||||||.||.|||||.||||||||.||.||||||||.||||||||.|||
RBAM_026170__ 542 TCCCTGAAACGTCAGGAATCGGCATCAAACCTGTTTCTGAAGAAGGCACA 591
BSNT_04253___ 592 AGCCGCTTGGTCAGAGCTGCCATTGATTATGCGATCGAGCATGGCCGCAA 641
||||||||.|||||||||||||||||.|||||||||||..|.|||||.||
RBAM_026170__ 592 AGCCGCTTAGTCAGAGCTGCCATTGAGTATGCGATCGAAAACGGCCGTAA 641
BSNT_04253___ 642 ATCTGTAACGCTTGTTCACAAAGGAAACATCATGAAGTTCACAGAAGGCG 691
.|||||.||||||||.||||||||||||||||||||||||||.|||||.|
RBAM_026170__ 642 GTCTGTCACGCTTGTCCACAAAGGAAACATCATGAAGTTCACTGAAGGGG 691
BSNT_04253___ 692 CGTTCAAAAACTGGGGCTATGAACTTGCTGAAAAAGAATACGGAGATAAA 741
|.||.||||||||||||||.||.|||||.||||.||||||||||||||||
RBAM_026170__ 692 CATTTAAAAACTGGGGCTACGAGCTTGCCGAAAGAGAATACGGAGATAAA 741
BSNT_04253___ 742 GTCTTCACATGGGCTCAATATGACCGCATTGCTGAAGAAGAAGGAAAAGA 791
||.|||||.||||||.|||||||||||||||..|||.||||.||||||||
RBAM_026170__ 742 GTATTCACTTGGGCTGAATATGACCGCATTGTCGAAAAAGACGGAAAAGA 791
BSNT_04253___ 792 CGCTGCCAACAAAGCGCAAAGCGAAGCGGAAGCAGCAGGAAAAATCATTA 841
.||.||..|.||||||||.|||||.||||||||.||||||||||||||..
RBAM_026170__ 792 AGCGGCTGATAAAGCGCAGAGCGATGCGGAAGCGGCAGGAAAAATCATCG 841
BSNT_04253___ 842 TCAAAGACAGCATTGCTGACATTTTCCTTCAGCAGATCTTAACGCGTCCA 891
|||||||||||||.|||||.|||||||||||||||||||||||.|||||.
RBAM_026170__ 842 TCAAAGACAGCATCGCTGATATTTTCCTTCAGCAGATCTTAACCCGTCCG 891
BSNT_04253___ 892 AACGAGTTTGATGTCGTTGCGACAATGAACTTGAACGGAGATTACATTTC 941
|.|||.||.||.|||||.||||||||||||||.||||||||.||.||.||
RBAM_026170__ 892 AGCGAATTCGACGTCGTGGCGACAATGAACTTAAACGGAGACTATATCTC 941
BSNT_04253___ 942 TGATGCTCTTGCTGCGCAAGTCGGCGGAATCGGCATTGCTCCTGGAGCGA 991
||||||.|||||.||.||.||.|||||||||||.||.||.||.|||||||
RBAM_026170__ 942 TGATGCGCTTGCCGCTCAGGTAGGCGGAATCGGAATCGCGCCGGGAGCGA 991
BSNT_04253___ 992 ACATCAACTACGAAACAGGACATGCGATTTTCGAGGCGACGCACGGAACG 1041
||||||||||.||||||||.||||||||||||||.|||||.|||||||||
RBAM_026170__ 992 ACATCAACTATGAAACAGGGCATGCGATTTTCGAAGCGACTCACGGAACG 1041
BSNT_04253___ 1042 GCTCCTAAATATGCAGGCCTTGATAAAGTAAACCCATCTTCAGTTATTCT 1091
||||||||||||||.||||||||.|||||.|||||.||.||.||.||.||
RBAM_026170__ 1042 GCTCCTAAATATGCCGGCCTTGACAAAGTCAACCCGTCATCCGTCATCCT 1091
BSNT_04253___ 1092 TTCAGGCGTTCTGCTTCTTGAGCATTTAGGA--TGGAACGAAGCGGCTGA 1139
||||||.||.||.||||||||.||..| || |||||.||.||.|||||
RBAM_026170__ 1092 TTCAGGAGTGCTTCTTCTTGAACACCT--GAACTGGAATGAGGCTGCTGA 1139
BSNT_04253___ 1140 TTTGGTTATCAAATCTATGGAAAAAACAATCGCTTCCAAAGTCGTAACTT 1189
.|||.|.||.|||||||||||||||||.||.|||||.|||||.|||||.|
RBAM_026170__ 1140 CTTGATCATTAAATCTATGGAAAAAACGATTGCTTCAAAAGTAGTAACGT 1189
BSNT_04253___ 1190 ACGATTTTGCCAGATTAATGGACGGGGCGACTGAAGTGAAATGTTCAGAG 1239
||||||||||.||||||||||||||.||.|||||||||||||||||||||
RBAM_026170__ 1190 ACGATTTTGCTAGATTAATGGACGGCGCAACTGAAGTGAAATGTTCAGAG 1239
BSNT_04253___ 1240 TTCGGAGAAGAACTGATCAAAAACATGGACTAA 1272
||.||.|||||.||.||.|||||||||||||.|
RBAM_026170__ 1240 TTTGGTGAAGAGCTAATTAAAAACATGGACTGA 1272
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