Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04001 and RBAM_024680
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:19
# Commandline: needle
# -asequence dna-align/BSNT_04001___yrzK.1.9828.seq
# -bsequence dna-align/RBAM_024680___yrzK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04001___yrzK-RBAM_024680___yrzK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04001___yrzK-RBAM_024680___yrzK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04001___yrzK
# 2: RBAM_024680___yrzK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 173
# Identity: 129/173 (74.6%)
# Similarity: 129/173 (74.6%)
# Gaps: 4/173 ( 2.3%)
# Score: 445.0
#
#
#=======================================
BSNT_04001___ 1 ATGAAATATCATCCAAAAATGGGACGTGCATTTCACGACGGTGAAGCGAA 50
|||||||||||.||||||||||||||.||..|.|||||.|..||||..||
RBAM_024680__ 1 ATGAAATATCAACCAAAAATGGGACGCGCGCTGCACGATGCGGAAGGAAA 50
BSNT_04001___ 51 TCTGCATTACAGCGATCA-CGCAGATCCCGATACGACTGGTTATCTTACG 99
||||||.|.|||.||||| .|| |||..|||.|.|.|.||||.||||...
RBAM_024680__ 51 TCTGCACTTCAGTGATCAGAGC-GATAGCGAAAAGGCGGGTTTTCTTGAA 99
BSNT_04001___ 100 GAAACAGCATCTGAATTTGGTCTTATGTCCAAAGAAGCAG-CGCTGAGGA 148
||.||.||..|.||.||.|||||..|.||.||||||||.| ||| .||||
RBAM_024680__ 100 GAGACGGCGACGGAGTTCGGTCTCTTATCGAAAGAAGCGGTCGC-AAGGA 148
BSNT_04001___ 149 AAAACAACCGGAATAAAGCTTGA 171
||||||..|||||||||.|||||
RBAM_024680__ 149 AAAACAGACGGAATAAAACTTGA 171
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