Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03959 and RBAM_024370
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:14
# Commandline: needle
# -asequence dna-align/BSNT_03959___mtn.1.9828.seq
# -bsequence dna-align/RBAM_024370___mtn.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03959___mtn-RBAM_024370___mtn.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03959___mtn-RBAM_024370___mtn.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03959___mtn
# 2: RBAM_024370___mtn
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 698
# Identity: 562/698 (80.5%)
# Similarity: 562/698 (80.5%)
# Gaps: 28/698 ( 4.0%)
# Score: 2338.0
#
#
#=======================================
BSNT_03959___ 1 ------------------------ATGGAAGAGGAAGTTACCATCTTAAG 26
|||||||||||||||||.||.|||||
RBAM_024370__ 1 ATGAAACTGGCAGTCATCGGAGCAATGGAAGAGGAAGTTACGATTTTAAG 50
BSNT_03959___ 27 AGACAAACTTGAAA-ATGCAAAAACAGAAACGATCGCACACTGTGAATTT 75
|..||||| ||||| |.||||||..|||.|.||||||.||||||||.|||
RBAM_024370__ 51 AAGCAAAC-TGAAAGACGCAAAACAAGAGATGATCGCTCACTGTGAGTTT 99
BSNT_03959___ 76 ACAACAGGCGAATATGAAGGAACTGAAGTGATTCTT-TTAAAATCAGGAA 124
|||||.|||...||||||||....|||||.| |||| .|.||||||||.|
RBAM_024370__ 100 ACAACTGGCAGCTATGAAGGCGTCGAAGTCA-TCTTGCTGAAATCAGGTA 148
BSNT_03959___ 125 TTGGAAAAGTAAATGCTGCTATCAGCACGACGCTTCTGCTTGACCGTTAC 174
|.||.|||||.||.||.||.||||||||||||||||||||||||||||.|
RBAM_024370__ 149 TCGGGAAAGTCAACGCGGCGATCAGCACGACGCTTCTGCTTGACCGTTTC 198
BSNT_03959___ 175 AAGCCTGATTATGTCATTAACACAGGCTCAGCCGGCGGATTTCATCATAC 224
||.|||||||||||.|||||||||||||||||.|||||.|||||||||||
RBAM_024370__ 199 AAACCTGATTATGTGATTAACACAGGCTCAGCGGGCGGTTTTCATCATAC 248
BSNT_03959___ 225 ATTGAATGTAGGGGATGTCGTCATTTCCACTGACGTTCGCCACCATGATG 274
||||||||||||.||.||||||||.||.||.||.||.|||||.|||||.|
RBAM_024370__ 249 ATTGAATGTAGGCGACGTCGTCATCTCAACAGATGTCCGCCATCATGACG 298
BSNT_03959___ 275 TAGACGTAACGGCTTTTGACTATGAATACGGCCAAGTGCCGGGTCTTCCG 324
|.||.||.|||||.|||||||||||||||||.||.|||||||||||||||
RBAM_024370__ 299 TGGATGTGACGGCGTTTGACTATGAATACGGACAGGTGCCGGGTCTTCCG 348
BSNT_03959___ 325 GCTGCTTATGCGGCGGATGAAAAGCTGATCAGCATCACTGAAGAAGCGGT 374
||.||.||....||.|||||||||||||||||.||.|||||.||||||||
RBAM_024370__ 349 GCAGCATACAAAGCTGATGAAAAGCTGATCAGTATTACTGAGGAAGCGGT 398
BSNT_03959___ 375 ATCTGAACTCGACGGCATTCAGGTTGCAAAAGGAACGATTGCAACAGGCG 424
.||||||||..||||||||||.||.||.|||||.||.||.|||||.||.|
RBAM_024370__ 399 TTCTGAACTTAACGGCATTCAAGTCGCCAAAGGCACAATCGCAACGGGAG 448
BSNT_03959___ 425 ATTCTTTCATGAACGATCCGAAGCGGGTTGAAGAGGTGCGTGCGAGATTT 474
|||||||.|||||.||||||||||||||||||||.||.||.||.|.||||
RBAM_024370__ 449 ATTCTTTTATGAATGATCCGAAGCGGGTTGAAGACGTACGCGCCAAATTT 498
BSNT_03959___ 475 TCTGATCTGTACGCGGTTGAAATGGAGGCTGCGGCAGTGGCTCAAGTGTG 524
.|.|||.|||||||||||||||||||.||||||||.||.||.||.|||||
RBAM_024370__ 499 GCGGATTTGTACGCGGTTGAAATGGAAGCTGCGGCTGTCGCACAGGTGTG 548
BSNT_03959___ 525 CCATCAATTTAAAACGCCGTTTGTCGTCATCAGAGCATTATCTGATATTG 574
|||.||.||.||||||||.|||||.|||||||||||.|||||||||||||
RBAM_024370__ 549 CCACCAGTTCAAAACGCCTTTTGTTGTCATCAGAGCTTTATCTGATATTG 598
BSNT_03959___ 575 CAGGAAAAGAATCACATGTTTCATTTGACCAATTTTTAGAGCAGGCGGCT 624
|.|||||||||||..|.|||||||||||..||||||||||.|||||.||.
RBAM_024370__ 599 CCGGAAAAGAATCTGACGTTTCATTTGATAAATTTTTAGAACAGGCTGCC 648
BSNT_03959___ 625 GTCCATTCAACAGAGCTTGTGTTAAAGGTGATCAAACGAATTCATTAA 672
||.||||||||.||||||||..|.||.||.||||||||||||||.|||
RBAM_024370__ 649 GTTCATTCAACTGAGCTTGTCCTGAATGTCATCAAACGAATTCACTAA 696
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