Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03815 and RBAM_023930

See Amino acid alignment / Visit BSNT_03815 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:09
# Commandline: needle
#    -asequence dna-align/BSNT_03815___yqeK.1.9828.seq
#    -bsequence dna-align/RBAM_023930___yqeK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03815___yqeK-RBAM_023930___yqeK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03815___yqeK-RBAM_023930___yqeK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03815___yqeK
# 2: RBAM_023930___yqeK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 571
# Identity:     423/571 (74.1%)
# Similarity:   423/571 (74.1%)
# Gaps:          20/571 ( 3.5%)
# Score: 1526.5
# 
#
#=======================================

BSNT_03815___      1 ATGAATCGTGAGGAGGCACTTGCATGCGTGAAGCAGCAATTGACCGAACA     50
                     ||||||||||||||.||||||||.|||||.||..||||..|||||||.||
RBAM_023930__      1 ATGAATCGTGAGGAAGCACTTGCCTGCGTCAAAGAGCAGCTGACCGAGCA     50

BSNT_03815___     51 CCGATATATCCATACGGTTGGCGTGATGAACACGGCGATCGAACTTGCGG    100
                     .||.||.|||||.||..|.|||||||...|.||||||.|....||.||.|
RBAM_023930__     51 TCGCTACATCCACACAATCGGCGTGACAGATACGGCGGTTATTCTCGCAG    100

BSNT_03815___    101 AGCGTTTTGGAGCCGATTCTAAAAAAGCGGAAACAGCGGCAATCTTTCAT    150
                     ..||.||.|||||.||..|.|||||||||||||..|||||..|.||||||
RBAM_023930__    101 GCCGGTTCGGAGCAGACCCGAAAAAAGCGGAAATGGCGGCTGTTTTTCAT    150

BSNT_03815___    151 GATTACGCCAAATTCCGCCCGAAAGAAGAAATGAAACAAATTATTGCGCG    200
                     |||||.||.||||||||.|||||||||||||||||.||.||.||.|.|||
RBAM_023930__    151 GATTATGCGAAATTCCGGCCGAAAGAAGAAATGAAGCAGATCATCGTGCG    200

BSNT_03815___    201 AGAAAAAATGCCTGCGCATTTATTGGATCATAATCCGGAGCTCTGGCACG    250
                     .|||||||||||.||..|..|.||||||.|.|||.|.|||||.|||||.|
RBAM_023930__    201 GGAAAAAATGCCGGCTGAGCTCTTGGATTACAATGCCGAGCTGTGGCATG    250

BSNT_03815___    251 CTCCGGTCGGCGCTTATTTGGTCCAAAGAGAGGCAGGGGTTCAAGATGA-    299
                     |.||.||.||.||.|||.|||...|.|.|||.|| ||||.|||  .||| 
RBAM_023930__    251 CCCCTGTGGGAGCGTATCTGGCTGAGAAAGAAGC-GGGGATCA--CTGAT    297

BSNT_03815___    300 ----AGACATTCTT-GACGCCATTAGGTATCATACCTCAGGGCGCCCCGG    344
                         |||   |||| ||.||.||..|.|||||.||.||||||||.||.||
RBAM_023930__    298 CCTGAGA---TCTTGGATGCAATCCGCTATCACACGTCAGGGCGTCCGGG    344

BSNT_03815___    345 CATGACACTTTTAGAAAAAGTCATTTACGTTGCCGATTACATTGAGCCAA    394
                     .|||||.||||||||.|||||||||||||||||.|||||||||||.||  
RBAM_023930__    345 AATGACCCTTTTAGACAAAGTCATTTACGTTGCGGATTACATTGAACC--    392

BSNT_03815___    395 ATCGGGC----ATTTCCCGGTGTCGATGAGGTGCGTAAGCTTGCTGAGAC    440
                       |||.|    .||||||||.||.||.||||||||....||.||.||.||
RBAM_023930__    393 --CGGCCGCCATTTTCCCGGAGTGGAAGAGGTGCGCCGTCTGGCGGAAAC    440

BSNT_03815___    441 AGATTTGAATCAAGCGCTGATTCAGTCCATTAAAAATACAATGGTTTTTC    490
                     .|||.||||..|||||||.||.||..|.||.||||||||||||.|.||||
RBAM_023930__    441 GGATCTGAACGAAGCGCTCATACAAGCGATGAAAAATACAATGATATTTC    490

BSNT_03815___    491 TTATGAAAAAAAATCAACCGGTTTTTCCAGACACATTTTTAACATATAAC    540
                     |.|||||||||||.||.|||||.|||||.||.||.|||..|||.||||||
RBAM_023930__    491 TGATGAAAAAAAACCAGCCGGTCTTTCCGGAGACGTTTGCAACCTATAAC    540

BSNT_03815___    541 TGGCTTGTGTCTGGCAGCTGA    561
                     |||||.||||||...|..|||
RBAM_023930__    541 TGGCTGGTGTCTCAAAATTGA    561


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