Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03754 and RBAM_023490
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:03
# Commandline: needle
# -asequence dna-align/BSNT_03754___yqfN.1.9828.seq
# -bsequence dna-align/RBAM_023490___yqfN.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03754___yqfN-RBAM_023490___yqfN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03754___yqfN-RBAM_023490___yqfN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03754___yqfN
# 2: RBAM_023490___yqfN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 741
# Identity: 478/741 (64.5%)
# Similarity: 478/741 (64.5%)
# Gaps: 126/741 (17.0%)
# Score: 1636.5
#
#
#=======================================
BSNT_03754___ 0 -------------------------------------------------- 0
RBAM_023490__ 1 ATGAAGTTATCTAAAAGATTGCAGTCTGTGGCGGAATATATCCCTCCGGG 50
BSNT_03754___ 1 -------ATGGCCGATATCGGCTCTGATCACGCATACCTTCCTTGTTATG 43
.|.||.||||||||.||.||.|||||.||.||||||||.||||
RBAM_023490__ 51 TGCCCTGGTTGCTGATATCGGGTCGGACCACGCGTATCTTCCTTGCTATG 100
BSNT_03754___ 44 CGGTGCTGAATCATAAAGCCAGCGGGGCGATTGCCGGAGAAATAACAGAC 93
|.||..||||||||...||.|||.||||.||.|||||.|||||.||||||
RBAM_023490__ 101 CCGTTTTGAATCATTTGGCAAGCCGGGCAATCGCCGGTGAAATTACAGAC 150
BSNT_03754___ 94 GGCCCATTTTTGTCTGCAAAGCGGCAGGTTGAAAAATCAGG-CTTAAACT 142
||.||.|||.|.||.||.||.|.||||||.|||||| |.|| |||||
RBAM_023490__ 151 GGACCGTTTCTATCCGCCAAACAGCAGGTGGAAAAA-CTGGACTTAA--- 196
BSNT_03754___ 143 CGCAC----ATTTCTGTAAGGCAGGGAGACGGACTGGAAGTGATTAAAAA 188
|||| ||.||.||||||.|.||.|||||.|||...||..||.||||
RBAM_023490__ 197 -GCACTCTTATCTCCGTAAGGAAAGGTGACGGGCTGAGCGTCCTTGAAAA 245
BSNT_03754___ 189 AGGTGAAGCTGATGCCATTACGATTGCCGGAATGGGCGGGGCTTTGATCG 238
|||.|||||.|..||||||||.||.|||||.||||||||.||..||||||
RBAM_023490__ 246 AGGAGAAGCCGGCGCCATTACAATCGCCGGCATGGGCGGAGCGCTGATCG 295
BSNT_03754___ 239 CTCACATTTTAGAAGCGGGCAAAGAC-AAATTAACGGGGAAGGAACGGCT 287
||||.|||||.||..|.|| |||.|| |||||.||||||...||||||||
RBAM_023490__ 296 CTCATATTTTGGAGTCCGG-AAAAACGAAATTGACGGGGCGTGAACGGCT 344
BSNT_03754___ 288 CATTTTACAGCCGAATATTCATGCTGTTCATATCAGGGAATGGCTTTATA 337
.|||.|.|||||||||||||||||.||||||||.||.||.|||||.|||.
RBAM_023490__ 345 GATTCTGCAGCCGAATATTCATGCCGTTCATATAAGAGAGTGGCTGTATC 394
BSNT_03754___ 338 AAGAAGGATATGCGCTGATAGATGAGGTAATCCTTGAAGAGGACGGAAAG 387
|.|||||.||||..|||||.|||||.||.||.||.|||||.|||||||||
RBAM_023490__ 395 AGGAAGGCTATGAACTGATTGATGAAGTGATTCTCGAAGAAGACGGAAAG 444
BSNT_03754___ 388 TGCTATGAGGTGCTGGTAGCAGAAGCGGGAGACAGGGATGCGGCTTAT-- 435
||.|||||..|.||.||.||.|||.|.||.|||.|.||||||.|.|||
RBAM_023490__ 445 TGTTATGAAATCCTCGTTGCGGAAACTGGCGACCGTGATGCGCCGTATCG 494
BSNT_03754___ 436 -GACGGT----ATTTCTTTATCAGCCGGGATGCTCGTCGGCCCTTTCTTG 480
||| || ||..|| |||||.|||||||..||.||.||.||.
RBAM_023490__ 495 GGAC-GTGCCGATGGCT------GCCGGAATGCTCGCGGGTCCGTTTTTA 537
BSNT_03754___ 481 GCAAAAGAAAAAAATGCTGTCTTTTT---GAAAAAGTGGACACAAGAGCT 527
..||||||.|..||||..||.|||.| |||| ||||..||.||.||
RBAM_023490__ 538 TTAAAAGAGAGGAATGAAGTGTTTCTTCGGAAA---TGGAGCCAGGAACT 584
BSNT_03754___ 528 TCAGCACACTCAAAGCATTTATGAACAGATCAGCCAAGCGGCGGATACAG 577
|.||||.|||.||...||||||||||||||||||| ||.||| ||.
RBAM_023490__ 585 TAAGCATACTGAACAAATTTATGAACAGATCAGCC--GCAGCG----CAA 628
BSNT_03754___ 578 AGC---AAAACAAACAAAAATTA---------AAGGAGC-----TCTCCG 610
||| ||||..|..|||||||| ||.|||| |||
RBAM_023490__ 629 AGCATGAAAATCATGAAAAATTAGCTGAATTGAAAGAGCGGATTTCT--- 675
BSNT_03754___ 611 ATCGAATGGAGCTGTTAAAGGAGGTAATCGATCATGGATAA 651
|||.|.|||||||||||||..||||..|||
RBAM_023490__ 676 -----------CTGCTGAAGGAGGTAATCGGACATGCTTAA 705
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