Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03698 and RBAM_023100
See
Amino acid alignment /
Visit
BSNT_03698 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:59
# Commandline: needle
# -asequence dna-align/BSNT_03698___yqgZ.1.9828.seq
# -bsequence dna-align/RBAM_023100___yqgZ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03698___yqgZ-RBAM_023100___yqgZ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03698___yqgZ-RBAM_023100___yqgZ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03698___yqgZ
# 2: RBAM_023100___yqgZ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 385
# Identity: 302/385 (78.4%)
# Similarity: 302/385 (78.4%)
# Gaps: 8/385 ( 2.1%)
# Score: 1179.0
#
#
#=======================================
BSNT_03698___ 1 ATGGAACAACAATTAACTTTTTACTCATATCCAAGCTGCACGTCATGCCG 50
|||.||.||| |.|.||||||.|||||.||.||||||||.||||||||
RBAM_023100__ 1 ATGAAAGAAC---TTATTTTTTATTCATACCCGAGCTGCACATCATGCCG 47
BSNT_03698___ 51 AAAAACAAAACATTGGCTTAAAGCACATCAA-ATTGAATTTAACGAACGG 99
||||||.|||||||||.|.|||||.|| ||| .||||.||..|.||.||.
RBAM_023100__ 48 AAAAACGAAACATTGGTTAAAAGCCCA-CAATGTTGACTTCCAAGAGCGC 96
BSNT_03698___ 100 CATTTATTCAGAGAAACCCCGACAAGAGAAGAATTAAAGTACATTTTATC 149
|||.|||||||.||.||.|||||||..||.|||||.|||.|.||.|||||
RBAM_023100__ 97 CATCTATTCAGGGAGACACCGACAATTGATGAATTGAAGCAGATCTTATC 146
BSNT_03698___ 150 GTTAACGACAGAAGGAATTGATGAAATTTTGGCGACAAGAAGCCAGACTT 199
.||||||||.|||||||||||||||||.||||||||.||||||||.||.|
RBAM_023100__ 147 ATTAACGACTGAAGGAATTGATGAAATATTGGCGACGAGAAGCCAAACAT 196
BSNT_03698___ 200 TCAAAAATTTAAATTTAAACATTGAAGAAATGACGGTAAATGAGGTGCTG 249
|.||||||.|.||..|.|||||||||||||||||.||||||||.||||||
RBAM_023100__ 197 TTAAAAATCTCAACCTGAACATTGAAGAAATGACTGTAAATGAAGTGCTG 246
BSNT_03698___ 250 GAACTTTTAATCGAGAAGCCGAAGCTTTTGCGACGCCCGATTCTAGTAGA 299
.|.|||||.|..|||||||||||.||..||||.||.||||||||..|.||
RBAM_023100__ 247 AAGCTTTTGACTGAGAAGCCGAAACTGCTGCGGCGTCCGATTCTGATCGA 296
BSNT_03698___ 300 CAACAAAAAGCTGGTGATTGGTTATAACCCGGGAGAACTGTTGAAGTTAT 349
...|||.|||||.||.||.||.||.||.||||||||||||.|||||.|..
RBAM_023100__ 297 TCGCAATAAGCTCGTTATCGGATACAATCCGGGAGAACTGATGAAGCTGA 346
BSNT_03698___ 350 CGAAGAAGAAAACGGTTCATCAATCTGCATGA--- 381
|||||||.||||||||.||||||||||.||.|
RBAM_023100__ 347 CGAAGAAAAAAACGGTACATCAATCTGTATCATAA 381
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.