Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03334 and RBAM_020520
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:30
# Commandline: needle
# -asequence dna-align/BSNT_03334___aspB.1.9828.seq
# -bsequence dna-align/RBAM_020520___aspB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03334___aspB-RBAM_020520___aspB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03334___aspB-RBAM_020520___aspB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03334___aspB
# 2: RBAM_020520___aspB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1190
# Identity: 932/1190 (78.3%)
# Similarity: 932/1190 (78.3%)
# Gaps: 16/1190 ( 1.3%)
# Score: 3608.0
#
#
#=======================================
BSNT_03334___ 1 TTGAAACTGGCAAAAAGAGTATCCGCATTAACACCATCAACCACACTGGC 50
||||||.||||||||||||||||||||||||||||.||..|.|||||.||
RBAM_020520__ 1 TTGAAATTGGCAAAAAGAGTATCCGCATTAACACCGTCTGCAACACTTGC 50
BSNT_03334___ 51 AATCACAGCGAAAGCGAAAGAACTGAAAGCCGCAGGCCATGATGTCATCG 100
|||.||.||.|||||||||||.||||||||.|.|||||||||||||||||
RBAM_020520__ 51 AATTACTGCAAAAGCGAAAGAGCTGAAAGCAGAAGGCCATGATGTCATCG 100
BSNT_03334___ 101 GCTTAGGAGCAGGCGAGCCTGACTTCAATACACCGCAGCATATTATTGAT 150
||.|.||||||||.||.||.||.||.|||||.||.|||||.|||||.|||
RBAM_020520__ 101 GCCTCGGAGCAGGAGAACCGGATTTTAATACGCCTCAGCACATTATAGAT 150
BSNT_03334___ 151 GCCGCTGTGCGTTCGATGAACGAGGGCCATACGAAATACACGCCTTCCGG 200
|||||.||||||||.|||||.||.||||||||||||||.||||||||.||
RBAM_020520__ 151 GCCGCGGTGCGTTCCATGAATGAAGGCCATACGAAATATACGCCTTCAGG 200
BSNT_03334___ 201 TGGTTTGGCTGAACTGAAAAACAGCATTGCAGAGAAATTTAAACGCGACC 250
.|||.||.|.|..||||||.||||.||.|||.|.|||||.|||..|||||
RBAM_020520__ 201 CGGTCTGCCGGCGCTGAAAGACAGTATCGCAAAAAAATTCAAAAACGACC 250
BSNT_03334___ 251 AGAATATTGAATACAAACCGTCTCAAATTATTGTCTGCACTGGTGCCAAA 300
||...||||||||.||.|||||..||||.|||||||||||.||.||.|||
RBAM_020520__ 251 AGGGGATTGAATATAAGCCGTCAGAAATCATTGTCTGCACCGGAGCGAAA 300
BSNT_03334___ 301 CATGCTCTGTATACCCTTTTCCAAGTGATTTTGGATGAAGAAGATGAAGT 350
||.|||||||||||..|.||.||.||.|||.|.|||||||..||.|||||
RBAM_020520__ 301 CACGCTCTGTATACATTATTTCAGGTTATTCTCGATGAAGGGGACGAAGT 350
BSNT_03334___ 351 TATTATTCCAACGCCTTACTGGGTAAGCTACCCGGAGCAGGTGAAACTCG 400
.|||||.||.||.|||||||||||.||||||||.||||||||||||||.|
RBAM_020520__ 351 GATTATACCGACTCCTTACTGGGTCAGCTACCCTGAGCAGGTGAAACTGG 400
BSNT_03334___ 401 CTGGCGGAAAGCCTGTTTATGTAGAAGGGCTTGAGGAA---AATCACTTC 447
|.||.||....||.||.||||.||||||||| |||| |||||.||.
RBAM_020520__ 401 CAGGGGGGCGTCCCGTCTATGCAGAAGGGCT---GGAATCCAATCAGTTT 447
BSNT_03334___ 448 AAAATTTCGCCTGAGCAGCTGAAAAATGCAATTACGGAAAAAACAAAAGC 497
||||||||.||.|||||||||||..|.||.||.|||||.|||||||||||
RBAM_020520__ 448 AAAATTTCACCGGAGCAGCTGAAGCAGGCTATCACGGAGAAAACAAAAGC 497
BSNT_03334___ 498 AATCGTTATTAACTCTCCAAGCAACCCGACTGGTGTCATGTATACGGAAG 547
..||.||||.||.||.||.|||||||||||.|||||.|||||||||.|||
RBAM_020520__ 498 GCTCATTATCAATTCACCGAGCAACCCGACAGGTGTTATGTATACGAAAG 547
BSNT_03334___ 548 AAGAACTATCTGCG---CTCGGTGAAGTGTGCCTTGAACATGATATCTTG 594
||||.|| |||| |||||..|||||||.||.||.||||..||..||
RBAM_020520__ 548 AAGAGCT---TGCGGAACTCGGAAAAGTGTGTCTGGAGCATGGCATTCTG 594
BSNT_03334___ 595 ATTGTGTCAGATGAAATTTATGAAAAACTTACATACGGCGGAAAGAAACA 644
||.||.||.||.||.||||||||.||.|||||||||||.|||||.|||||
RBAM_020520__ 595 ATCGTTTCTGACGAGATTTATGAGAAGCTTACATACGGAGGAAAAAAACA 644
BSNT_03334___ 645 TGTTTCCATTGCACAGCTGTCAGACAGACTGAAAGAACAAACGGTCATTA 694
.||.||.||.||||||||.||||....|.|||||||.||.|||.||||.|
RBAM_020520__ 645 CGTCTCAATCGCACAGCTTTCAGGTGAATTGAAAGAGCAGACGATCATCA 694
BSNT_03334___ 695 TAAACGGCGTATCGAAGTCCCACAGCATGACAGGTTGGAGAATCGGTTAT 744
|.||||||||.|||||.||.|||||||||||.||.|||||.|||||.|||
RBAM_020520__ 695 TTAACGGCGTGTCGAAATCTCACAGCATGACGGGCTGGAGGATCGGCTAT 744
BSNT_03334___ 745 GCGGCAGGCTCTGAAGAC-ATTATTAAAGCGATGACGAACCTTGCAAGCC 793
|||||.||.|| |.|||| |||||||||||||||||||.||||||.||||
RBAM_020520__ 745 GCGGCGGGTTC-GGAGACGATTATTAAAGCGATGACGAGCCTTGCGAGCC 793
BSNT_03334___ 794 ACAGCACGTCAAACCCGACATCAATCGCACAATACGGAGCGATTGCTGCT 843
|||||||.|||||.|||||.||.|||||.||||||||.||.|||||.||.
RBAM_020520__ 794 ACAGCACATCAAATCCGACGTCCATCGCTCAATACGGCGCTATTGCGGCC 843
BSNT_03334___ 844 TATAACGGGCCTTCTGAGCCATTGGAAGAAATGAGAGAAGCATTTGAACA 893
|||||||||||..|||||||..|||||||.||||||.|.||||||||.||
RBAM_020520__ 844 TATAACGGGCCGGCTGAGCCGCTGGAAGAGATGAGACAGGCATTTGAGCA 893
BSNT_03334___ 894 TAGATTAAATACGATCTATGCAAAGCTCATAGAAATCCCAGGGTTCAGCT 943
.|||.|.||.||.||.||.||..||||||..||.||.||.||.||||.||
RBAM_020520__ 894 CAGACTGAACACCATTTACGCTCAGCTCAGTGAGATTCCCGGATTCACCT 943
BSNT_03334___ 944 GTGTGAAGCCGGAAGGTGCTTTTTACTTATTCCCAAATGCAAAAGAGGCA 993
||||.|||||.|||||.||.||||||||.|||||.||.||.||||.|||.
RBAM_020520__ 944 GTGTCAAGCCTGAAGGGGCGTTTTACTTGTTCCCTAACGCCAAAGCGGCC 993
BSNT_03334___ 994 GCTCAATCTTGCGGTTTCAAAGATGTAGATGAATTTGTTAAAGCGCTTCT 1043
||..||...||.||.|||||||||||.|||||||..||.||.||||||||
RBAM_020520__ 994 GCAGAAAACTGTGGATTCAAAGATGTCGATGAATACGTCAAGGCGCTTCT 1043
BSNT_03334___ 1044 CGAGGAGGAAAAAGTTGCGATTGTTCCAGGATCCGGATTTGGCTCTCCTG 1093
.||.||.||||||||.||..|.||.||.||.||.||.||.||.||.||.|
RBAM_020520__ 1044 GGAAGAAGAAAAAGTCGCCGTCGTGCCGGGCTCGGGTTTCGGTTCACCGG 1093
BSNT_03334___ 1094 AGAATGTCCGTCTT-TCTTATGCAACATCGTTAGATCTTCTTGAAAAAGC 1142
|.||.||||| ||| |||||.|||||.||..|.||||||.|.|||.||||
RBAM_020520__ 1094 ACAACGTCCG-CTTATCTTACGCAACGTCACTCGATCTTTTAGAAGAAGC 1142
BSNT_03334___ 1143 CATTGAAAGAATCAAGCGTTTTGTAGAAAAACATAGCTAA 1182
..|.|||||||||...||.||....||||||||.||||.|
RBAM_020520__ 1143 GGTCGAAAGAATCCGCCGCTTCACGGAAAAACACAGCTGA 1182
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