Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03117 and RBAM_018910
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:58
# Commandline: needle
# -asequence dna-align/BSNT_03117___yozB.1.9828.seq
# -bsequence dna-align/RBAM_018910___yozB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03117___yozB-RBAM_018910___yozB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03117___yozB-RBAM_018910___yozB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03117___yozB
# 2: RBAM_018910___yozB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 541
# Identity: 439/541 (81.1%)
# Similarity: 439/541 (81.1%)
# Gaps: 8/541 ( 1.5%)
# Score: 1777.0
#
#
#=======================================
BSNT_03117___ 1 ATGAACCAAACAGAAAATAAACCGAAAAATTACACGGGGATTGTCCTTAC 50
|||||.||.||||||||.|||||.||||.|||.||.||.||.||.||.||
RBAM_018910__ 1 ATGAATCAGACAGAAAACAAACCTAAAAGTTATACCGGTATCGTGCTGAC 50
BSNT_03117___ 51 GCTGACAGTTCTGATTAACGGTTTAATCGCAGTGCTGTTTTTTATGCCTA 100
..||||.||||||||.|||||.|||||.||.|||||||||||||||||.|
RBAM_018910__ 51 ATTGACCGTTCTGATCAACGGGTTAATTGCGGTGCTGTTTTTTATGCCGA 100
BSNT_03117___ 101 AATTAGATCAGTTCAGCCATGCGAATATTCACATTTTGCCAATGCTGAAT 150
|||..|..|||.|||||..|||.||||||||.|||.||||.|||.|.|||
RBAM_018910__ 101 AATCGGGACAGGTCAGCATTGCCAATATTCATATTCTGCCGATGTTAAAT 150
BSNT_03117___ 151 GCGATATTCAACAGCTTTACGTTTATCTTCTTATTGGCCGCGCTGATTAT 200
||.||.||.|||||||||||.||||||||.||..||||.|||||..||||
RBAM_018910__ 151 GCCATTTTTAACAGCTTTACTTTTATCTTTTTGCTGGCAGCGCTCTTTAT 200
BSNT_03117___ 201 GATTAAACAGAAAAATATCAAAGCTCACAAACGCTTTATTTTGGCCGCGT 250
||||||.||.||||||||..||||.||.|||||.|||||||||||.||||
RBAM_018910__ 201 GATTAAGCAAAAAAATATTCAAGCGCATAAACGTTTTATTTTGGCGGCGT 250
BSNT_03117___ 251 TCACAACAACATTACTATTTTTGATTTGCTATGTGACG--TACCACTCGA 298
|.||.||.||.||.||.||||||||.|||||||| || ||||||||..
RBAM_018910__ 251 TTACGACGACTTTGCTGTTTTTGATCTGCTATGT--CGTATACCACTCTG 298
BSNT_03117___ 299 TTGCGGAAAACACGCTCTAT--GGCGGAGAAGGTATTATGCGCCCGATTT 346
|.||.|||||.| ||.||| |||||..|.|||||.||.||...|||||
RBAM_018910__ 299 TGGCTGAAAATA--CTTTATTCGGCGGCCACGGTATCATTCGGGGGATTT 346
BSNT_03117___ 347 ATTTCTTTATTTTAATTACACATATCTGCCTTTCTGCAATTATTGTGCCG 396
|||||||||||||||||||.||.|||||.|||||.||..||||.||||||
RBAM_018910__ 347 ATTTCTTTATTTTAATTACGCACATCTGTCTTTCCGCCGTTATCGTGCCG 396
BSNT_03117___ 397 CTTGCGCTGTTTACGCTGATCAGAGGCTTCAGCATGCAGGTGGAGCGCCA 446
||||||||||||||||||||||||||.|||||||||||.|||||||||||
RBAM_018910__ 397 CTTGCGCTGTTTACGCTGATCAGAGGATTCAGCATGCAAGTGGAGCGCCA 446
BSNT_03117___ 447 CAAAAAAATTGCGAGATGGACAATGCCTCTATGGCTGTATGTAAGCCTTA 496
|||||||||.|||||||||||.|||||.||.|||||||||||.||.||.|
RBAM_018910__ 447 CAAAAAAATCGCGAGATGGACGATGCCGCTCTGGCTGTATGTCAGTCTGA 496
BSNT_03117___ 497 CAGGCGTTATTGTATATTTGATGATTTCACCGTATTACTAA 537
|.||.||.||||||||.||.|||||.|||||||||||.|||
RBAM_018910__ 497 CGGGTGTCATTGTATACTTAATGATCTCACCGTATTATTAA 537
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