Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02736 and RBAM_016740
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:41
# Commandline: needle
# -asequence dna-align/BSNT_02736.1.9828.seq
# -bsequence dna-align/RBAM_016740.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02736-RBAM_016740.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02736-RBAM_016740.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02736
# 2: RBAM_016740
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 793
# Identity: 669/793 (84.4%)
# Similarity: 669/793 (84.4%)
# Gaps: 2/793 ( 0.3%)
# Score: 2837.0
#
#
#=======================================
BSNT_02736 1 TTGGCAAAGCTCGAATGGTATTTTGAATATGAAATTCAAGTGAACCGCCC 50
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_016740 1 TTGGCAAAGCTCGAATGGTATTTTGAATATGAAATTCAAGTGAACCGCCC 50
BSNT_02736 51 CGGACTGCTCGGGGATATTTCATCTCTTCTTGGGATGCTTTCTATCAACA 100
|||.||||||||||||||||||||||||||.||||||||.||.||.||.|
RBAM_016740 51 CGGCCTGCTCGGGGATATTTCATCTCTTCTCGGGATGCTGTCAATTAATA 100
BSNT_02736 101 TCGTAACGATAAACGGCGTCGATCTTTCCAGAAGGGGAATGCTCCTCAGG 150
|.||.||.||.|||||.|||||.||||||||||||||||||||.|||||.
RBAM_016740 101 TTGTCACAATTAACGGTGTCGACCTTTCCAGAAGGGGAATGCTGCTCAGA 150
BSNT_02736 151 TGCCGCCATATAGATCAAATTAAACGATTAGAATCAATCTTAAAAACGAT 200
|||||.|||||||||||||||||||||||.||||||||.||||||||.||
RBAM_016740 151 TGCCGGCATATAGATCAAATTAAACGATTGGAATCAATTTTAAAAACAAT 200
BSNT_02736 201 GGAAACAATTAAAGTAACGAAGCTTAGAGAACCGAGGCTTCGCGACCGAC 250
|||.||.|||||||||||||||||.|||||||||||||||||||||||.|
RBAM_016740 201 GGAGACCATTAAAGTAACGAAGCTGAGAGAACCGAGGCTTCGCGACCGTC 250
BSNT_02736 251 TTGCCGTACGCCACGGCCGTTATATTCAACGGGATGCCGATGACAAGAAA 300
|.||.||.||||||||..|.||.|||||.||.||||||||||||||.|||
RBAM_016740 251 TCGCAGTCCGCCACGGAAGATACATTCAGCGTGATGCCGATGACAAAAAA 300
BSNT_02736 301 ACGTTCCGCTTTGAACGGGACGAGCTTGG-CTTATTAGTCGATTTTATGG 349
||.|||||.||||||.||||||||||.|| ||| .|.||.||.|||||||
RBAM_016740 301 ACCTTCCGTTTTGAAAGGGACGAGCTCGGTCTT-CTGGTTGACTTTATGG 349
BSNT_02736 350 CCGAATTGTTCAAAAAAGAAGGCCATAAATTAATCGGAATCAGAGGTATG 399
||||..||||.|||||||||||.||.|||.|.|||||||||.|.||.|||
RBAM_016740 350 CCGAGCTGTTTAAAAAAGAAGGGCACAAACTGATCGGAATCCGGGGAATG 399
BSNT_02736 400 CCGCGTGTCGGGAAAACGGAATCGATTGTAGCCTCTAGTGTGTGTGCAAG 449
|||.|.|||||.||||||||.||.||.||.||.||.||.||.|||||.||
RBAM_016740 400 CCGAGGGTCGGAAAAACGGAGTCCATCGTTGCGTCAAGCGTTTGTGCCAG 449
BSNT_02736 450 CAAAAGGTGGCTGTTTGTGTCATCAACCTTGCTGAAGCAGACGATAAGAA 499
||||||.|||||.||.||.||||||||..||||.||.||.|||||..|.|
RBAM_016740 450 CAAAAGATGGCTTTTCGTATCATCAACGCTGCTAAAACAAACGATCCGGA 499
BSNT_02736 500 GCCAGCTGATTGCCGATGAATACAGCACTGAAAATGTCTTTATCGTTGAC 549
||||||||.|||||||||||||||||||.|||||.||.||||||.|.|||
RBAM_016740 500 GCCAGCTGGTTGCCGATGAATACAGCACGGAAAACGTGTTTATCCTCGAC 549
BSNT_02736 550 GGAATTGTGTCAACACGAAGAGGATCGGAACGCCATCTCCAGCTGGTCCG 599
||.||.||.||.|||.||.|.|||||.||.||||||||.|||||.|||.|
RBAM_016740 550 GGCATCGTTTCGACAAGACGGGGATCTGAGCGCCATCTTCAGCTCGTCAG 599
BSNT_02736 600 AGAAATCATGCGGCTGCCTGCAACAAAAGTGGTGGAGCATCCGGACATAT 649
.|||||.||||||||.||.||.|||||.||.||||||||.||.||.||.|
RBAM_016740 600 TGAAATTATGCGGCTTCCGGCGACAAAGGTCGTGGAGCACCCCGATATTT 649
BSNT_02736 650 TCGTTCAAAATACAGAGTATACACTAGATGACTTTGATTATATTATTGAA 699
|.|||||||||.|.||||||||.||.|||||.||.|||||||||||.|||
RBAM_016740 650 TTGTTCAAAATTCGGAGTATACGCTCGATGATTTCGATTATATTATCGAA 699
BSNT_02736 700 CTGAGAAATGACCCTGATGAGGTTATTACATATGAACATGCCGAGGAACC 749
||.||||||||.|||||.||.||||||||||||||||||||.||.|||||
RBAM_016740 700 CTCAGAAATGATCCTGACGAAGTTATTACATATGAACATGCAGAAGAACC 749
BSNT_02736 750 CCAAATGTTTGATCAATCCGGGTTTTCAAGCTTTGATTTTTAA 792
.|||||.||||||||..||||.|||||||||||||||||||||
RBAM_016740 750 GCAAATATTTGATCAGACCGGTTTTTCAAGCTTTGATTTTTAA 792
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