Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02440 and RBAM_014520
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:10
# Commandline: needle
# -asequence dna-align/BSNT_02440.1.9828.seq
# -bsequence dna-align/RBAM_014520___ykzI.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02440-RBAM_014520___ykzI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02440-RBAM_014520___ykzI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02440
# 2: RBAM_014520___ykzI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 246
# Identity: 158/246 (64.2%)
# Similarity: 158/246 (64.2%)
# Gaps: 57/246 (23.2%)
# Score: 666.0
#
#
#=======================================
BSNT_02440 1 ATGGCAAAATGGGATGCTTTTTTACAAACAAATGATCTCTGGAAGGGGCG 50
RBAM_014520__ 0 -------------------------------------------------- 0
BSNT_02440 51 AAAGACAATGAGGCAAGTTGTAAAAGAGGGATTTAAGGAAGAGAAAAACA 100
|||||||||||.||.||.||.|||||.|.|||.||.|||||.|
RBAM_014520__ 1 -------ATGAGGCAAGTGGTGAAGGAAGGATTCAGGGAGGAAAAAAATA 43
BSNT_02440 101 ATCGTGTTGCTGTCTGGAGACTAGAGGTTGATTATGAATTGGCAACCCTA 150
|.|||||.|||||||||||||||||||||||||||||||||||||||||.
RBAM_014520__ 44 ACCGTGTAGCTGTCTGGAGACTAGAGGTTGATTATGAATTGGCAACCCTG 93
BSNT_02440 151 TATGAAGCAATGCAGAAAGAAAATGAAGAGCAGATTGAACAAAGCAAAAA 200
|||||.||.|||||.|||||.||||.|||.||.||.||.|..|||||||.
RBAM_014520__ 94 TATGAGGCCATGCAAAAAGAGAATGCAGATCAAATCGATCTCAGCAAAAG 143
BSNT_02440 201 CAAACTTGAGCGACTTAGAAAAGAATGGATTCGTCTTAACGGGTAA 246
.|||||.||.||.||.|||||||||||||||||.||||||||.|||
RBAM_014520__ 144 AAAACTGGAACGTCTCAGAAAAGAATGGATTCGGCTTAACGGATAA 189
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