Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01871 and RBAM_011150
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:35
# Commandline: needle
# -asequence dna-align/BSNT_01871___yitW.1.9828.seq
# -bsequence dna-align/RBAM_011150___yitW.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01871___yitW-RBAM_011150___yitW.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01871___yitW-RBAM_011150___yitW.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01871___yitW
# 2: RBAM_011150___yitW
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 309
# Identity: 258/309 (83.5%)
# Similarity: 258/309 (83.5%)
# Gaps: 0/309 ( 0.0%)
# Score: 1086.0
#
#
#=======================================
BSNT_01871___ 1 GTGGAAGAAGCATTAAAAGAAAACATCATGGGCGCCCTGGAACAGGTTGT 50
||||||||||||||||||||||||||||||||||||.||||.||||||||
RBAM_011150__ 1 GTGGAAGAAGCATTAAAAGAAAACATCATGGGCGCCTTGGAGCAGGTTGT 50
BSNT_01871___ 51 CGATCCTGAGCTTGGCGTTGATATCGTGAACCTTGGTTTGGTATACGATG 100
.||.||||||||.|||||.||||||||.||.||.||..|.||||||||.|
RBAM_011150__ 51 TGACCCTGAGCTCGGCGTCGATATCGTCAATCTCGGCCTTGTATACGACG 100
BSNT_01871___ 101 TTGACATGGATGAAGACGGCTTAACGCACGTGACGATGACACTGACATCA 150
||||.||||||||.||||||.|.||||||||.||||||||||||||||||
RBAM_011150__ 101 TTGATATGGATGACGACGGCCTGACGCACGTTACGATGACACTGACATCA 150
BSNT_01871___ 151 ATGGGATGCCCTTTAGCGCCGATTATCGTGGATGAGGTGAAAAAAGCATT 200
|||||.|||||..|.||.|||||.|||||.||.||||||||||||||..|
RBAM_011150__ 151 ATGGGGTGCCCGCTCGCTCCGATCATCGTCGACGAGGTGAAAAAAGCGCT 200
BSNT_01871___ 201 AGCGGACCTTCCTGAAGTGAAAGACACAGAGGTTCACATTGTATGGAATC 250
.||.|||.||||.||.||.|||||.||.|||||.|||||.||.|||||||
RBAM_011150__ 201 CGCCGACATTCCGGATGTAAAAGAGACGGAGGTCCACATCGTCTGGAATC 250
BSNT_01871___ 251 CGCCTTGGACTAGGGATAAAATGTCCAGATACGCAAAAATTGCGCTTGGC 300
||||||||||.||.||.||||||||..|.|||||||||||.||..|.||.
RBAM_011150__ 251 CGCCTTGGACAAGAGACAAAATGTCACGCTACGCAAAAATCGCATTAGGG 300
BSNT_01871___ 301 ATTCAATAA 309
|||||.|||
RBAM_011150__ 301 ATTCAGTAA 309
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