Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03866 and RBAM_010750
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:10
# Commandline: needle
# -asequence dna-align/BSNT_03866___blt.1.9828.seq
# -bsequence dna-align/RBAM_010750___blt.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03866___blt-RBAM_010750___blt.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03866___blt-RBAM_010750___blt.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03866___blt
# 2: RBAM_010750___blt
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1232
# Identity: 871/1232 (70.7%)
# Similarity: 871/1232 (70.7%)
# Gaps: 64/1232 ( 5.2%)
# Score: 2983.0
#
#
#=======================================
BSNT_03866___ 1 ATGAAAAAATCAATAAATGAGCAAAAAACGATATTCATTATACTATTAAG 50
|||.|||||.|.||.|..||.|||||..|..||.||||.||..|||||||
RBAM_010750__ 1 ATGCAAAAACCGATCAGAGAACAAAAGGCTGTACTCATCATCTTATTAAG 50
BSNT_03866___ 51 CAACATCTTCGTAGCATTTCTTGGTATCGGTTTAATCATTCCAGTTATGC 100
|||.||.||..|.||.|||.|.||.|||||.||.||||||||.|||||||
RBAM_010750__ 51 CAATATATTTATTGCGTTTTTAGGCATCGGATTGATCATTCCCGTTATGC 100
BSNT_03866___ 101 CTTCT-TTTATGAAAATCATGCATTTATCCGGCAGCACAATGGGTTATCT 149
| .|| ||||||||..|.|||||.||..|.||||||||||||||.||.||
RBAM_010750__ 101 C-GCTGTTTATGAATGTGATGCACTTGACGGGCAGCACAATGGGATACCT 149
BSNT_03866___ 150 TGTTGCGGCTTTTGCCATTTCTCAGTTAATTACTTCACCTTTTGCAGGTA 199
|||.||.||.||.|||.||.|.|||||||||.|.||.||..||||.||.|
RBAM_010750__ 150 TGTCGCTGCCTTCGCCGTTGCGCAGTTAATTGCATCCCCCATTGCGGGGA 199
BSNT_03866___ 200 GGTGGGTTGACCGTTTCGGGAGAAAAAAAATGATTATTCTCGGGTTGCTT 249
|.|||||||||||.|||||.|||||||..||||||.|...|||..||.||
RBAM_010750__ 200 GATGGGTTGACCGCTTCGGCAGAAAAATCATGATTCTCGCCGGACTGTTT 249
BSNT_03866___ 250 ATATTCAGTTTATCTGAGTTGATTTTCGGATTAGGGACCCATGTTTCAAT 299
.|.|||...|||||.||..|||..||||||||.||.||.|||||.||.||
RBAM_010750__ 250 TTGTTCGCATTATCCGAACTGACCTTCGGATTGGGCACACATGTCTCCAT 299
BSNT_03866___ 300 ATTTTATTTCTCCAGGATATTGGGTGGTATAAGTGCGGCTTTTATCATGC 349
.||.||||||.|.|||.|..||||.||.||.|||||.|||||||||||||
RBAM_010750__ 300 TTTATATTTCGCAAGGGTGCTGGGGGGCATCAGTGCCGCTTTTATCATGC 349
BSNT_03866___ 350 CCGCGGTAACAGCATATGTAGCTGATATTACAACCCTAAAGGAAAGGTCA 399
||||.||.|||||.|||||.||.||||||||.||..|..|||||||.||.
RBAM_010750__ 350 CCGCTGTTACAGCGTATGTCGCAGATATTACGACGGTGCAGGAAAGATCG 399
BSNT_03866___ 400 AAGGCTATGGGGTATGTTTCTGCTGCAATTAGCACCGGCTTTATTATTGG 449
|||||.|||||.|||||.|||||.||.||.|||||.||.|||||.||.||
RBAM_010750__ 400 AAGGCGATGGGCTATGTATCTGCCGCCATCAGCACAGGGTTTATCATCGG 449
BSNT_03866___ 450 GCCTGGTGCGGGAGGATTTATTGCCGGCTTTGGCATTCGCATGCCGTTTT 499
|||.||....||||||||||||||||.....|||.||||.||||||||||
RBAM_010750__ 450 GCCCGGCATAGGAGGATTTATTGCCGATCACGGCGTTCGTATGCCGTTTT 499
BSNT_03866___ 500 TCTTAACCTCCGCC----ATCGCGTTAATAGCAGCTGTCACTTCC---GT 542
|||| |.||.| ||.||.||.||.||| ||.|.|||| ||
RBAM_010750__ 500 TCTT----TGCGGCGGGAATTGCATTTATCGCA---GTGATTTCCTCTGT 542
BSNT_03866___ 543 TTTTATACTAAAAGAGTCATTGTCGATAGAAGAACGC-CATCAACTCTCT 591
.|||||.||.||||||.|.||..|.|.|||||||||| || ||
RBAM_010750__ 543 CTTTATGCTGAAAGAGCCGTTAACTAAAGAAGAACGCGCA--AA------ 584
BSNT_03866___ 592 TCTCATACAAAG-------GAATCAAATTTCATTAAAGACTTGAAGAGAT 634
.|..||..|||| |||||||.||||.|.|||||.|||||.|..|
RBAM_010750__ 585 GCAGATGGAAAGCGTCAAAGAATCAACTTTCTTAAAAGATTTGAAAAAGT 634
BSNT_03866___ 635 CCATTCATCCTGTCTATTTGATTGCATTTATTATCGTCTTTGTGATGGCT 684
|.||||||||...|||.|||||.||.|||||.|||||.|||||..||||.
RBAM_010750__ 635 CGATTCATCCAAACTACTTGATCGCCTTTATCATCGTTTTTGTTTTGGCA 684
BSNT_03866___ 685 TTTGGTTTATCAGCTTATGAAACGGTATTCAGCTTGTTTTCTGATCATAA 734
||.||..|.||.||.||.|||||||||||||||||.|||.|..|.|||||
RBAM_010750__ 685 TTCGGACTGTCGGCGTACGAAACGGTATTCAGCTTATTTACAAACCATAA 734
BSNT_03866___ 735 ATTTGGCTTCACACCAAAAGATATTGCAGCCATTATCACGATTAGTTCCA 784
|||.||||||||.|||||.|||||.||....|||||.|||.|.||.||||
RBAM_010750__ 735 ATTCGGCTTCACGCCAAAGGATATCGCCATTATTATTACGTTCAGCTCCA 784
BSNT_03866___ 785 TTGTTGCGGTAGTTATTCAAGTTTTACTATTCGGGAAATTGGTCGACAAA 834
||||.|||||..|.||||||||..|....|||||.|.|.|.||| ||
RBAM_010750__ 785 TTGTGGCGGTCCTCATTCAAGTGCTCGCGTTCGGAAGACTTGTC----AA 830
BSNT_03866___ 835 CTT----GGAGAGAAAAGAATGATTCAGCTGTGCTTAATAATTGGTGCGA 880
||| ||.|||||||.|.|.||||||||.||..|.||.||.||.||..
RBAM_010750__ 831 CTTCCTCGGGGAGAAAAAAGTCATTCAGCTTTGTCTGATCATCGGCGCTG 880
BSNT_03866___ 881 TCTTAGCTTTCGTGTCTACTGTTATGTCAGGATTTTTAACTGTTTTGCT- 929
|..|.||||||||.|||||.||.||||||||||||||..|.| ||||
RBAM_010750__ 881 TGCTGGCTTTCGTTTCTACGGTGATGTCAGGATTTTTGCCCG---TGCTC 927
BSNT_03866___ 930 --TGTAACTTGTTTTATTTTTCTGGCGTTCGATTTGCTACGTCCCGCCTT 977
|||.||.||..|.|||||.||.|||||.|||||.||.||.||.||..|
RBAM_010750__ 928 GCTGTCACCTGCATCATTTTCCTTGCGTTTGATTTACTGCGCCCGGCACT 977
BSNT_03866___ 978 AACCGCTCATTTATCCAATATCGCCGGTAACCAGCAGGGTTTCGTAGCAG 1027
.||..||.|||||||.||.|||||.||.||.||||||||.||.||.||.|
RBAM_010750__ 978 GACTACTTATTTATCGAAAATCGCAGGAAATCAGCAGGGGTTTGTTGCCG 1027
BSNT_03866___ 1028 GCATGAACTCCACATATACCAGCCTGGGAAATATATTTGGACCTGCTCTA 1077
|.||||||||.|||||.||.||..||||.|.|||.||.||.||.|||||.
RBAM_010750__ 1028 GTATGAACTCAACATACACGAGTTTGGGCACTATTTTCGGCCCGGCTCTG 1077
BSNT_03866___ 1078 GGCGGTATACTATTTGATCTTAACATTCATTATCCTTTCCTTTTTGCAGG 1127
||||||||..||||||||.|.||.|||||.|..||.||.||.||.|||||
RBAM_010750__ 1078 GGCGGTATTTTATTTGATATGAATATTCACTTCCCGTTTCTATTCGCAGG 1127
BSNT_03866___ 1128 TTTCGTTATGGTTGTCGGCCTTGGTCTTACAATGGTTTGGAAAGAAAAAA 1177
|.|.|||.|..||.||||.||.||..|.||..|.||.|||||||.||||
RBAM_010750__ 1128 TGTGGTTTTATTTCTCGGTCTGGGATTGACCTTTGTGTGGAAAGGAAAA- 1176
BSNT_03866___ 1178 AGAATGATGCTGCA------GCTTTGAATTAA 1203
||| |.||.|.|.||.
RBAM_010750__ 1177 -----------GCAGGCGAGGTTTCGGAGTAG 1197
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