Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01777 and RBAM_010700
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:29
# Commandline: needle
# -asequence dna-align/BSNT_01777___yhjE.1.9828.seq
# -bsequence dna-align/RBAM_010700___yhjE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01777___yhjE-RBAM_010700___yhjE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01777___yhjE-RBAM_010700___yhjE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01777___yhjE
# 2: RBAM_010700___yhjE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 647
# Identity: 471/647 (72.8%)
# Similarity: 471/647 (72.8%)
# Gaps: 43/647 ( 6.6%)
# Score: 1635.0
#
#
#=======================================
BSNT_01777___ 1 ATGTTGGAGCATTTTTTATCCTATTTGACACAAGAACATTTAACTGAATT 50
||||||||.||||||||.||||||||..|.|||||..|.||.||||.
RBAM_010700__ 1 ---TTGGAGCAATTTTTATCATATTTGACTGAGGAACAGCTGACGGAATG 47
BSNT_01777___ 51 ATTTCAAAGCTATAGGGCTTTCGGTCC-GCTCATAGCTG-TGCTG--CTG 96
.||.|||||||||||.||||||||.|| || .|||| .|||| |||
RBAM_010700__ 48 GTTCCAAAGCTATAGAGCTTTCGGCCCGGC----GGCTGCGGCTGCACTG 93
BSNT_01777___ 97 CCTTTAATTGAAGCATTTCTCCCGTTTTTGCCGCTGATCGTGTTTGTGGT 146
|||||.||||||||.|||||.||||||||||||||..|.||.||||||||
RBAM_010700__ 94 CCTTTTATTGAAGCGTTTCTTCCGTTTTTGCCGCTCGTTGTATTTGTGGT 143
BSNT_01777___ 147 GGCGAATACGAACTCGTTTGGCTTGTGGGAAGGATTCATCCTGTCTTGG- 195
||||||||||||..|.|||||.|||||||||||.||..|.|||||.|||
RBAM_010700__ 144 GGCGAATACGAATGCATTTGGTTTGTGGGAAGGTTTTTTTCTGTCATGGC 193
BSNT_01777___ 196 GCGGGATCAACTGCTGGTTCCATTCTCGTATTTTTGAT--TGTCCGTCAA 243
.|||| ||..|.||.||.||.||.|| .||.|||.|| .|||||.|..
RBAM_010700__ 194 TCGGG-TCTGCGGCAGGATCGATGCT--GATGTTTTATGCCGTCCGCCGT 240
BSNT_01777___ 244 TACGGACAGAGAAAATTGCTT--GGATTTATCCGCAGTCATCCGTCTGTA 291
|.||||| ||||||..|||| ||.||.||||||||.||||.|.|..||
RBAM_010700__ 241 TTCGGAC--AGAAAAGAGCTTTCGGTTTCATCCGCAGGCATCAGACCATA 288
BSNT_01777___ 292 AGAAAGCTGATGTTATGGGTGGAAAGGCACGGCTTCGGTCCCATGTTTCT 341
||...|.|||||.|.|||||.||..|||||||.||||||||..|||||.|
RBAM_010700__ 289 AGGCGGATGATGCTCTGGGTTGAGCGGCACGGTTTCGGTCCGCTGTTTAT 338
BSNT_01777___ 342 TCTGCTTTGTTTTCCATTTACACCGTCAGCCGCAGTGAATGTTGTTGCTG 391
|.|.|||||.||.||.|||||.|||||.||.||.||..||.|.|||||.|
RBAM_010700__ 339 TTTACTTTGCTTCCCCTTTACGCCGTCCGCTGCGGTTCATATCGTTGCCG 388
BSNT_01777___ 392 GTTTGTCAAGGATCGGAACGCGGCCGTTTATTTTGGCGGCAGCCTC---G 438
||.|||||.||.|.||..|||.||.|||||||| |.||||||.| |
RBAM_010700__ 389 GTCTGTCACGGGTGGGGGCGCTGCAGTTTATTT---CAGCAGCCGCTATG 435
BSNT_01777___ 439 GGGAAGCTTGTCATGATTTTTATGATCAGCTTCATCGGATATGATCTGCA 488
|||||..|.|||||||||||||||||||||||.|||||.||||||||.||
RBAM_010700__ 436 GGGAAAATGGTCATGATTTTTATGATCAGCTTTATCGGGTATGATCTTCA 485
BSNT_01777___ 489 CGCGCTGATTACACAGCCGATTC-GAACGGTCATCGCCGTATTGGTGATC 537
|||.||.||.|||||||| .||| |.|.||....||||.||.||||||||
RBAM_010700__ 486 CGCACTCATGACACAGCC-TTTCAGGATGGCGGGCGCCATAATGGTGATC 534
BSNT_01777___ 538 ACTGTCTTATGGTATGTCGGCAAAAAGGTGGAGCGG----TATCTGTATG 583
.|.||..|.|||||||.|||.||..|..|.||.||| || |.| |||
RBAM_010700__ 535 GCGGTGCTGTGGTATGCCGGAAAGCATATCGAACGGCGTTTA-CAG-ATG 582
BSNT_01777___ 584 TAAGAGCCAGTCAGCGTGAGCATGATGGAGGGAGACAGTAA------ 624
|||..||||||||.||||.|.||.||||||||||||.||
RBAM_010700__ 583 --AGAATCAGTCAGCATGAGAAAGACGGAGGGAGACAGGAATCTTGA 627
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